RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
LRRC28-213ENST00000559399 MAP3K14Q99558 947 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 LY9Q9HBG7 655 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 CUL9Q8IWT3 2517 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 FRMPD4Q14CM0 1322 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 PRC1O43663 620 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 CKBP12277 381 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 KCNJ6P48051 423 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 SP2Q02086 613 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 PTK7Q13308 1070 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 TJAP1Q5JTD0 557 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 RRP36Q96EU6 259 aaKnown RBP17.26■□□□□ 0.35
LRRC28-213ENST00000559399 ZFP91Q96JP5 570 aaPredicted RBP17.26■□□□□ 0.35
LRRC28-213ENST00000559399 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 MYL10Q9BUA6 226 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
LRRC28-213ENST00000559399 SEC63Q9UGP8 760 aaKnown RBP17.26■□□□□ 0.35
LRRC28-213ENST00000559399 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
LRRC28-213ENST00000559399 STAM2O75886 525 aa17.25■□□□□ 0.35
LRRC28-213ENST00000559399 MCM5P33992 734 aa17.25■□□□□ 0.35
LRRC28-213ENST00000559399 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
LRRC28-213ENST00000559399 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
LRRC28-213ENST00000559399 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
LRRC28-213ENST00000559399 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
LRRC28-213ENST00000559399 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 CXCL10P02778 98 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 GNAQP50148 359 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 MRPS9P82933 396 aaKnown RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 GPNMBQ14956 572 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 CNKSR3Q6P9H4 555 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 ATXN2LQ8WWM7 1075 aaKnown RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 CUL5Q93034 780 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 INPP4AQ96PE3 977 aaPredicted RBP17.24■□□□□ 0.35
LRRC28-213ENST00000559399 ESYT1Q9BSJ8 1104 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 C16orf70Q9BSU1 422 aa17.24■□□□□ 0.35
LRRC28-213ENST00000559399 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 SLC27A2O14975 620 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 FIBPO43427 364 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 NBNO60934 754 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 ICAM3P32942 547 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
LRRC28-213ENST00000559399 NEDD9Q14511 834 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 TRIM71Q2Q1W2 868 aaKnown RBP17.23■□□□□ 0.35
LRRC28-213ENST00000559399 METTL7BQ6UX53 244 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 WNT8BQ93098 351 aa17.23■□□□□ 0.35
LRRC28-213ENST00000559399 SPATA31C2B4DYI2 1134 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 H3BRB1 525 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 TLL1O43897 1013 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 PLEKHA8P1O95397 391 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 LGALS2P05162 132 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 CALM1P0DP23 149 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 CALM2P0DP24 149 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 CALM3P0DP25 149 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
LRRC28-213ENST00000559399 TAP1Q03518 808 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 XRRA1Q6P2D8 792 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 SERINC5Q86VE9 423 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 TUT1Q9H6E5 874 aaKnown RBP17.22■□□□□ 0.35
LRRC28-213ENST00000559399 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 RTEL1Q9NZ71 1219 aa17.22■□□□□ 0.35
LRRC28-213ENST00000559399 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 C17orf102A2RUQ5 167 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 MEIS2O14770 477 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
LRRC28-213ENST00000559399 EFCAB14O75071 495 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 RXRAP19793 462 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 LIFRP42702 1097 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 HIC1Q14526 733 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 ZNF618Q5T7W0 954 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
LRRC28-213ENST00000559399 ASB2Q96Q27 587 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
LRRC28-213ENST00000559399 CERS4Q9HA82 394 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
LRRC28-213ENST00000559399 EMSYQ7Z589 1322 aa17.21■□□□□ 0.34
LRRC28-213ENST00000559399 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 CHD7Q9P2D1 2997 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 ARHGEF15O94989 841 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 SMIM10L2AP0DMW4 78 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 SMIM10L2BP0DMW5 78 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 HOXC8P31273 242 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 THPOP40225 353 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms