RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PITPNM1O00562 1244 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 CCND2P30279 289 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 HIC1Q14526 733 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 GPNMBQ14956 572 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 KIAA0753Q2KHM9 967 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 CELF3Q5SZQ8 465 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 MYSM1Q5VVJ2 828 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 ZNF654Q8IZM8 581 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 MICALL1Q8N3F8 863 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 PPTC7Q8NI37 304 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 WNT8BQ93098 351 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 SPATA33Q96N06 139 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 RTEL1Q9NZ71 1219 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 GTF2IRD1Q9UHL9 959 aa23.73■■□□□ 1.39
TSPAN3-206ENST00000559373 PRC1O43663 620 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 CA3P07451 260 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 PFKMP08237 780 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 ACTN1P12814 892 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 UBA1P22314 1058 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 EMID1Q96A84 441 aaPredicted RBP23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 LRRC2Q9BYS8 371 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 PCDHA11Q9Y5I1 949 aa23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 COL4A4P53420 1690 aaPredicted RBP23.72■■□□□ 1.39
TSPAN3-206ENST00000559373 ARHGEF15O94989 841 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 PLEKHA8P1O95397 391 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 RFC2P35250 354 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 TCTN1Q2MV58 587 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 CASC1Q6TDU7 716 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 NFXL1Q6ZNB6 911 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 SESTD1Q86VW0 696 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 MAP3K20Q9NYL2 800 aaKnown RBP23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 TELO2Q9Y4R8 837 aa23.71■■□□□ 1.39
TSPAN3-206ENST00000559373 hCG_1642624A0A1W2PR95 340 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 F2P00734 622 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 CKBP12277 381 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 MRPS9P82933 396 aaKnown RBP23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 USP17L6PQ6QN14 398 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 LRRC8DQ7L1W4 858 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 MLXIPQ9HAP2 919 aa23.7■■□□□ 1.38
TSPAN3-206ENST00000559373 HAS3O00219 553 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 SLC27A2O14975 620 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 SPRED2Q7Z698 418 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 CCDC82Q8N4S0 544 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 CCDC155Q8N6L0 562 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 CTCFLQ8NI51 663 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 CAGE1Q8TC20 777 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 ESYT1Q9BSJ8 1104 aa23.69■■□□□ 1.38
TSPAN3-206ENST00000559373 EPOPA6NHQ4 379 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 NBNO60934 754 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 SELPP16109 830 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 KRT40Q6A162 431 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 SRBD1Q8N5C6 995 aaKnown RBP23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 SAMD3Q8N6K7 520 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 AFAP1L1Q8TED9 768 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 RRP36Q96EU6 259 aaKnown RBP23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 KATNAL1Q9BW62 490 aa23.68■■□□□ 1.38
TSPAN3-206ENST00000559373 CCDC69A6NI79 296 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 PPFIA4O75335 1185 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 MCM5P33992 734 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 DEFB103AP81534 67 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SP4Q02446 784 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SEMA3FQ13275 785 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 ZNF618Q5T7W0 954 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 CREB3L3Q68CJ9 461 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 KCNV1Q6PIU1 500 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 HERC6Q8IVU3 1022 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SMARCC2Q8TAQ2 1214 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SLC9A7Q96T83 725 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 C16orf70Q9BSU1 422 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 ANO2Q9NQ90 1003 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 SIP14410 1827 aa23.67■■□□□ 1.38
TSPAN3-206ENST00000559373 TTC28Q96AY4 2481 aa23.66■■□□□ 1.38
TSPAN3-206ENST00000559373 TRAF1Q13077 416 aa23.66■■□□□ 1.38
TSPAN3-206ENST00000559373 CYFIP1Q7L576 1253 aa23.66■■□□□ 1.38
TSPAN3-206ENST00000559373 SPZ1Q9BXG8 430 aa23.66■■□□□ 1.38
TSPAN3-206ENST00000559373 NLRC5Q86WI3 1866 aa23.66■■□□□ 1.38
TSPAN3-206ENST00000559373 MEIS2O14770 477 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 DDAH1O94760 285 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 HOXD8P13378 290 aaPredicted RBP23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 KIF5BP33176 963 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 KCNJ6P48051 423 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 WDR5P61964 334 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 PTK7Q13308 1070 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 TRIM71Q2Q1W2 868 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 FAM117BQ6P1L5 589 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 ARNTL2Q8WYA1 636 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 SEC63Q9UGP8 760 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 XIRP2A4UGR9 3374 aa23.65■■□□□ 1.38
TSPAN3-206ENST00000559373 LCHNA4D1U4 455 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 LGALS2P05162 132 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 TGFB3P10600 412 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 TAP1Q03518 808 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 MBTPS1Q14703 1052 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 NECTIN1Q15223 517 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 TRAF7Q6Q0C0 670 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 TRIM50Q86XT4 487 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 TCEANC2Q96MN5 208 aa23.64■■□□□ 1.37
TSPAN3-206ENST00000559373 FRMPD4Q14CM0 1322 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms