RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 AKR1B1P15121 316 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 MRPS25P82663 173 aaKnown RBP18.36■□□□□ 0.53
SPG11-215ENST00000559193 MYOCDQ8IZQ8 938 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 PROM2Q8N271 834 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 RUBCNQ92622 972 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 HAS1Q92839 578 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 GJA10Q969M2 543 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 TANGO6Q9C0B7 1094 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 LRRC27Q9C0I9 530 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 GGA1Q9UJY5 639 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 TRIM66O15016 1216 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 ATP2B4P23634 1241 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 GABPAQ06546 454 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 PPP4R3AQ6IN85 833 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 PRR5LQ6MZQ0 368 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 CACNA2D4Q7Z3S7 1137 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
SPG11-215ENST00000559193 ZFP91Q96JP5 570 aaPredicted RBP18.35■□□□□ 0.53
SPG11-215ENST00000559193 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
SPG11-215ENST00000559193 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
SPG11-215ENST00000559193 RASSF7Q02833 373 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 HAUS3Q68CZ6 603 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 SND1Q7KZF4 910 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPG11-215ENST00000559193 TLR10Q9BXR5 811 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 FGFBP2Q9BYJ0 223 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 DDX25Q9UHL0 483 aaKnown RBP18.35■□□□□ 0.53
SPG11-215ENST00000559193 DAGLAQ9Y4D2 1042 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 COL4A3BPQ9Y5P4 624 aa18.35■□□□□ 0.53
SPG11-215ENST00000559193 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 GOLGA6BA6NDN3 693 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 NOL4O94818 638 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 MATR3P43243 847 aaKnown RBP eCLIP18.34■□□□□ 0.53
SPG11-215ENST00000559193 SLC7A5Q01650 507 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
SPG11-215ENST00000559193 NLRC4Q9NPP4 1024 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 RBAK-RBAKDNI3L0D1 243 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 TLR2O60603 784 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 KLHDC7AQ5VTJ3 777 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 CEP72Q9P209 647 aa18.34■□□□□ 0.53
SPG11-215ENST00000559193 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.53
SPG11-215ENST00000559193 PNMA6FA0A0J9YX94 578 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 BUB1O43683 1085 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 FKBP3Q00688 224 aaKnown RBP18.33■□□□□ 0.52
SPG11-215ENST00000559193 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 PICALMQ13492 652 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 TDRD12Q587J7 1177 aaKnown RBP18.33■□□□□ 0.52
SPG11-215ENST00000559193 FAM26FQ5R3K3 315 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 CCDC181Q5TID7 509 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 VPS72Q15906 364 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 CCDC40Q4G0X9 1142 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 C10orf67Q8IYJ2 551 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 NOX5Q96PH1 765 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 PANK4Q9NVE7 773 aa18.33■□□□□ 0.52
SPG11-215ENST00000559193 TRAF5O00463 557 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 SEPT2Q15019 361 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 RBM12Q9NTZ6 932 aaKnown RBP18.32■□□□□ 0.52
SPG11-215ENST00000559193 STIM2Q9P246 746 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 MYH10P35580 1976 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 CERKQ8TCT0 537 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
SPG11-215ENST00000559193 PLEKHA4Q9H4M7 779 aa18.32■□□□□ 0.52
SPG11-215ENST00000559193 SHOX2O60902 331 aaPredicted RBP18.31■□□□□ 0.52
SPG11-215ENST00000559193 APBA1Q02410 837 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 HYIQ5T013 277 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 SFMBT2Q5VUG0 894 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 RNF10Q8N5U6 811 aaKnown RBP18.31■□□□□ 0.52
SPG11-215ENST00000559193 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
SPG11-215ENST00000559193 CUL5Q93034 780 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 RASSF4Q9H2L5 321 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 TBC1D7Q9P0N9 293 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 PCDHA2Q9Y5H9 948 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 GOLGA6CA6NDK9 693 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 TTLL1O95922 423 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 SSBP05455 408 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPG11-215ENST00000559193 GOLGA6DP0CG33 693 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 FAM76AQ8TAV0 307 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 CEP63Q96MT8 703 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms