RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PTMSP20962 102 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 TXKP42681 527 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 MTMR1Q13613 665 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 NLRX1Q86UT6 975 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 ZNF579Q8NAF0 562 aaKnown RBP20.44■□□□□ 0.86
CLPX-203ENST00000558958 NPLOC4Q8TAT6 608 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 GJA10Q969M2 543 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 MAML3Q96JK9 1138 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 PLXNA1Q9UIW2 1896 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 MAFGO15525 162 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 MARCH6O60337 910 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 KIF22Q14807 665 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 MAMDC4Q6UXC1 1216 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 UIMC1Q96RL1 719 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 CSRNP2Q9H175 543 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 CEP350Q5VT06 3117 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 MGAMO43451 1857 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 LONP1P36776 959 aaKnown RBP20.43■□□□□ 0.86
CLPX-203ENST00000558958 RGS2P41220 211 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 FXR2P51116 673 aaKnown RBP eCLIP20.43■□□□□ 0.861e-9■■■■□ 22
CLPX-203ENST00000558958 CAP1Q01518 475 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 GNPTABQ3T906 1256 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 SHC4Q6S5L8 630 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 SLC5A5Q92911 643 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 ZNF577Q9BSK1 485 aa20.43■□□□□ 0.86
CLPX-203ENST00000558958 TTC12Q9H892 705 aaPredicted RBP20.43■□□□□ 0.86
CLPX-203ENST00000558958 AGO4Q9HCK5 861 aaKnown RBP20.43■□□□□ 0.86
CLPX-203ENST00000558958 SPATA31C2B4DYI2 1134 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 IPO5O00410 1097 aaKnown RBP20.42■□□□□ 0.86
CLPX-203ENST00000558958 CMA1P23946 247 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 ICAM3P32942 547 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 TECP42680 631 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 SEMA3FQ13275 785 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 MSL3Q8N5Y2 521 aaKnown RBP20.42■□□□□ 0.86
CLPX-203ENST00000558958 CDHR1Q96JP9 859 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 BEGAINQ9BUH8 593 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 PCDHA12Q9UN75 941 aa20.42■□□□□ 0.86
CLPX-203ENST00000558958 LRRC37A2A6NM11 1700 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 PDIA5Q14554 519 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 TMEM266Q2M3C6 531 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 SPECC1Q5M775 1068 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 RESP18Q5W5W9 173 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 IGSF22Q8N9C0 903 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 APBA2Q99767 749 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 TINF2Q9BSI4 451 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 ZSWIM8A7E2V4 1837 aa20.41■□□□□ 0.86
CLPX-203ENST00000558958 SYNGAP1Q96PV0 1343 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 PSMD10O75832 226 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 CYP2B6P20813 491 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 LRCH2Q5VUJ6 765 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 SEPT14Q6ZU15 432 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 EEPD1Q7L9B9 569 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 CD99L2Q8TCZ2 262 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 MRPS27Q92552 414 aaKnown RBP20.4■□□□□ 0.86
CLPX-203ENST00000558958 AK8Q96MA6 479 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 RIT2Q99578 217 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 WBP1LQ9NX94 342 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 VAV3Q9UKW4 847 aa20.4■□□□□ 0.86
CLPX-203ENST00000558958 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
CLPX-203ENST00000558958 FKTNO75072 461 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 ATP9AO75110 1047 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 SNAI1O95863 264 aaPredicted RBP20.39■□□□□ 0.85
CLPX-203ENST00000558958 XRCC5P13010 732 aaKnown RBP20.39■□□□□ 0.85
CLPX-203ENST00000558958 SPIRE1Q08AE8 756 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.85
CLPX-203ENST00000558958 OLFML2BQ68BL8 750 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 USP49Q70CQ1 688 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 FSIP1Q8NA03 581 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 GPT2Q8TD30 523 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 RAB34Q9BZG1 259 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 GOLPH3LQ9H4A5 285 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.39■□□□□ 0.85
CLPX-203ENST00000558958 GABRQQ9UN88 632 aa20.39■□□□□ 0.85
CLPX-203ENST00000558958 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 GAS7O60861 476 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 IGHA2P01877 340 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 KCNA2P16389 499 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 FLT3LGP49771 235 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 OTOP1Q7RTM1 612 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 FBXO16Q8IX29 292 aaPredicted RBP20.38■□□□□ 0.85
CLPX-203ENST00000558958 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
CLPX-203ENST00000558958 SYMPKQ92797 1274 aaKnown RBP20.38■□□□□ 0.85
CLPX-203ENST00000558958 ERO1AQ96HE7 468 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 EPSTI1Q96J88 318 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 KATNBL1Q9H079 304 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 VTA1Q9NP79 307 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 FLRT1Q9NZU1 646 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 PKD2L1Q9P0L9 805 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 LRWD1Q9UFC0 647 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 MCM3APO60318 1980 aa20.38■□□□□ 0.85
CLPX-203ENST00000558958 A0A1B0GVL5 298 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 POTEMA6NI47 508 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 MBD3O95983 291 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 TGFB3P10600 412 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 PRKCZQ05513 592 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 PPP2R5CQ13362 524 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms