RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 LENG9Q96B70 501 aa13.4□□□□□ -0.26
CCDC33-204ENST00000558645 MPHOSPH6Q99547 160 aaKnown RBP13.4□□□□□ -0.26
CCDC33-204ENST00000558645 ZSCAN16Q9H4T2 348 aaPredicted RBP13.4□□□□□ -0.26
CCDC33-204ENST00000558645 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
CCDC33-204ENST00000558645 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
CCDC33-204ENST00000558645 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
CCDC33-204ENST00000558645 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
CCDC33-204ENST00000558645 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
CCDC33-204ENST00000558645 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.27
CCDC33-204ENST00000558645 B4DLN1 442 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 CIITAP33076 1130 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 NUCB2P80303 420 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 SP2Q02086 613 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 LY6KQ17RY6 165 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 MSL3Q8N5Y2 521 aaKnown RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 INPP4AQ96PE3 977 aaPredicted RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 TMEM60Q9H2L4 133 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 ABHD16BQ9H3Z7 469 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 JADE2Q9NQC1 790 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 DDX25Q9UHL0 483 aaKnown RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
CCDC33-204ENST00000558645 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
CCDC33-204ENST00000558645 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
CCDC33-204ENST00000558645 MEIS1O00470 390 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 MSH4O15457 936 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 ATP9AO75110 1047 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 CYP3A7P24462 503 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 CNGA1P29973 690 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 MTMR1Q13613 665 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
CCDC33-204ENST00000558645 SLC9C1Q4G0N8 1177 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 RILPL1Q5EBL4 403 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 TRMT44Q8IYL2 757 aaKnown RBP13.38□□□□□ -0.27
CCDC33-204ENST00000558645 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
CCDC33-204ENST00000558645 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
CCDC33-204ENST00000558645 NEMFO60524 1076 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
CCDC33-204ENST00000558645 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
CCDC33-204ENST00000558645 SMPD1P17405 629 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
CCDC33-204ENST00000558645 MTFR1Q15390 333 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
CCDC33-204ENST00000558645 Q4G0T1 1027 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 PPP4R3AQ6IN85 833 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 NLRX1Q86UT6 975 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 ZNF333Q96JL9 665 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
CCDC33-204ENST00000558645 EVPLQ92817 2033 aa13.37□□□□□ -0.27
CCDC33-204ENST00000558645 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 FIBPO43427 364 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 STAM2O75886 525 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 GCFC2P16383 781 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 KCNA2P16389 499 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 UBA1P22314 1058 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 SP4Q02446 784 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 PTGDRQ13258 359 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 CALCRLQ16602 461 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 HAS1Q92839 578 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
CCDC33-204ENST00000558645 DDX41Q9UJV9 622 aaKnown RBP13.36□□□□□ -0.27
CCDC33-204ENST00000558645 LOXHD1Q8IVV2 1947 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
CCDC33-204ENST00000558645 MYH11P35749 1972 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 IPO5O00410 1097 aaKnown RBP13.35□□□□□ -0.27
CCDC33-204ENST00000558645 GGPS1O95749 300 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 MARCKSP29966 332 aaPredicted RBP13.35□□□□□ -0.27
CCDC33-204ENST00000558645 ICAM3P32942 547 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
CCDC33-204ENST00000558645 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 PTPAQ15257 358 aa13.35□□□□□ -0.27
CCDC33-204ENST00000558645 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms