RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 TLK2Q86UE8 772 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 GPRASP2Q96D09 838 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 FOXP1Q9H334 677 aaPredicted RBP19.85■□□□□ 0.77
TPM1-214ENST00000558544 JADE2Q9NQC1 790 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 DDX41Q9UJV9 622 aaKnown RBP19.85■□□□□ 0.77
TPM1-214ENST00000558544 VPS37CA5D8V6 355 aaPredicted RBP19.84■□□□□ 0.77
TPM1-214ENST00000558544 SPATA31C2B4DYI2 1134 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 PGK1P00558 417 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 TFRCP02786 760 aaKnown RBP19.84■□□□□ 0.77
TPM1-214ENST00000558544 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
TPM1-214ENST00000558544 PDCP20941 246 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 UBA1P22314 1058 aaKnown RBP19.84■□□□□ 0.77
TPM1-214ENST00000558544 USP11P51784 963 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 LETM2Q2VYF4 491 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 KCNV1Q6PIU1 500 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 NEK8Q86SG6 692 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 CRISPLD2Q9H0B8 497 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 PKD2L1Q9P0L9 805 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 OGDHLQ9ULD0 1010 aa19.84■□□□□ 0.77
TPM1-214ENST00000558544 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 NKRFO15226 690 aaKnown RBP eCLIP19.83■□□□□ 0.77
TPM1-214ENST00000558544 SORBS3O60504 671 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 TDP2O95551 362 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 SYT1P21579 422 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 CIITAP33076 1130 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 IRX5P78411 483 aaPredicted RBP19.83■□□□□ 0.77
TPM1-214ENST00000558544 SP2Q02086 613 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 PLA2G4DQ86XP0 818 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 NOSTRINQ8IVI9 506 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.77
TPM1-214ENST00000558544 MYADML2A6NDP7 307 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 MEIS1O00470 390 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 DYNC1LI2O43237 492 aaPredicted RBP19.83■□□□□ 0.76
TPM1-214ENST00000558544 ADAMTS4O75173 837 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 C6orf222P0C671 652 aaPredicted RBP19.83■□□□□ 0.76
TPM1-214ENST00000558544 ARP10275 920 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 TGFB3P10600 412 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 EN2P19622 333 aaPredicted RBP19.83■□□□□ 0.76
TPM1-214ENST00000558544 U2AF2P26368 475 aaKnown RBP eCLIP19.83■□□□□ 0.764e-8■■■■■ 35.5
TPM1-214ENST00000558544 GJA9P57773 515 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 SETQ01105 290 aaPredicted RBP19.83■□□□□ 0.76
TPM1-214ENST00000558544 PRR16Q569H4 304 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 NIPA1Q7RTP0 329 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 CDHR1Q96JP9 859 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 AP5M1Q9H0R1 490 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 UPF3AQ9H1J1 476 aaKnown RBP19.83■□□□□ 0.76
TPM1-214ENST00000558544 KCNH7Q9NS40 1196 aa19.83■□□□□ 0.76
TPM1-214ENST00000558544 WDR81Q562E7 1941 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 ATP9AO75110 1047 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 GGPS1O95749 300 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 GH1P01241 217 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 ARHGAP1Q07960 439 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 LENG9Q96B70 501 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 UIMC1Q96RL1 719 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 BCAS3Q9H6U6 928 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 SPC25Q9HBM1 224 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 Q9Y3F1 56 aa19.82■□□□□ 0.76
TPM1-214ENST00000558544 MAFGO15525 162 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 CCNT1O60563 726 aaKnown RBP19.81■□□□□ 0.76
TPM1-214ENST00000558544 KCNA2P16389 499 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 BEX3Q00994 111 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 LRRC41Q15345 812 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 MOXD1Q6UVY6 613 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 RNF180Q86T96 592 aa19.81■□□□□ 0.76
TPM1-214ENST00000558544 DHX37Q8IY37 1157 aaKnown RBP19.81■□□□□ 0.76
TPM1-214ENST00000558544 AGO4Q9HCK5 861 aaKnown RBP19.81■□□□□ 0.76
TPM1-214ENST00000558544 DDX25Q9UHL0 483 aaKnown RBP19.81■□□□□ 0.76
TPM1-214ENST00000558544 CYP3A7-CYP3A51PA0A087WV96 503 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 WNT7AO00755 349 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 CTAGE5O15320 804 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 STX6O43752 255 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 SLC37A4O43826 429 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 ATP2B1P20020 1258 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 CYP3A7P24462 503 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
TPM1-214ENST00000558544 NEDD9Q14511 834 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 Q4G0T1 1027 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 CELF3Q5SZQ8 465 aaKnown RBP19.8■□□□□ 0.76
TPM1-214ENST00000558544 CYFIP1Q7L576 1253 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 ARRDC4Q8NCT1 418 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 MBOAT7Q96N66 472 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 SENP7Q9BQF6 1050 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 MLXIPQ9HAP2 919 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 MKI67P46013 3256 aaKnown RBP19.8■□□□□ 0.76
TPM1-214ENST00000558544 DNAH12Q6ZR08 3092 aa19.8■□□□□ 0.76
TPM1-214ENST00000558544 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 GCFC2P16383 781 aaKnown RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 ITGB3BPQ13352 177 aaPredicted RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 FSCN1Q16658 493 aaKnown RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 MYSM1Q5VVJ2 828 aa19.79■□□□□ 0.76
TPM1-214ENST00000558544 PPP4R3AQ6IN85 833 aa19.79■□□□□ 0.76
TPM1-214ENST00000558544 KLHDC9Q8NEP7 349 aa19.79■□□□□ 0.76
TPM1-214ENST00000558544 EMID1Q96A84 441 aaPredicted RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 NAP1L4Q99733 375 aaKnown RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 ZNF577Q9BSK1 485 aa19.79■□□□□ 0.76
TPM1-214ENST00000558544 NOL7Q9UMY1 257 aaKnown RBP19.79■□□□□ 0.76
TPM1-214ENST00000558544 MTMR6Q9Y217 621 aa19.79■□□□□ 0.76
TPM1-214ENST00000558544 KBTBD13C9JR72 458 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms