RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 IGDCC4Q8TDY8 1250 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 AFAP1L1Q8TED9 768 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 MAP3K20Q9NYL2 800 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 GBF1Q92538 1859 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 KIAA1217Q5T5P2 1943 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 NOP56O00567 594 aaKnown RBP17.95■□□□□ 0.46
TPM1-211ENST00000558314 KIF5BP33176 963 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 SKIV2LQ15477 1246 aaKnown RBP17.95■□□□□ 0.46
TPM1-211ENST00000558314 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 KCNV1Q6PIU1 500 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 TMCO2Q7Z6W1 182 aaPredicted RBP17.95■□□□□ 0.46
TPM1-211ENST00000558314 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 CMTR1Q8N1G2 835 aaKnown RBP17.95■□□□□ 0.46
TPM1-211ENST00000558314 CUL5Q93034 780 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 EMID1Q96A84 441 aaPredicted RBP17.95■□□□□ 0.46
TPM1-211ENST00000558314 SLC9A7Q96T83 725 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 LRRC2Q9BYS8 371 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 BCAS3Q9H6U6 928 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 LY9Q9HBG7 655 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 ANO2Q9NQ90 1003 aa17.95■□□□□ 0.46
TPM1-211ENST00000558314 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 CKBP12277 381 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 GHRHRQ02643 423 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 USP17L6PQ6QN14 398 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 SESTD1Q86VW0 696 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 HERC6Q8IVU3 1022 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 SAMD3Q8N6K7 520 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 ARNTL2Q8WYA1 636 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 CTAGE1Q96RT6 745 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 EYSQ5T1H1 3165 aa17.94■□□□□ 0.46
TPM1-211ENST00000558314 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 SLC27A2O14975 620 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 TLL1O43897 1013 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 PPFIA4O75335 1185 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 DDAH1O94760 285 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 F2P00734 622 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 MCM5P33992 734 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 UTP14CQ5TAP6 766 aaKnown RBP17.93■□□□□ 0.46
TPM1-211ENST00000558314 FAM117BQ6P1L5 589 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 SYMPKQ92797 1274 aaKnown RBP17.93■□□□□ 0.46
TPM1-211ENST00000558314 ESYT1Q9BSJ8 1104 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 LSG1Q9H089 658 aaKnown RBP17.93■□□□□ 0.46
TPM1-211ENST00000558314 MYH7BA7E2Y1 1941 aa17.93■□□□□ 0.46
TPM1-211ENST00000558314 TRIP12Q14669 1992 aaPredicted RBP17.92■□□□□ 0.46
TPM1-211ENST00000558314 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
TPM1-211ENST00000558314 THPOP40225 353 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 PTK7Q13308 1070 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 ZNF618Q5T7W0 954 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 CYFIP1Q7L576 1253 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 WNT8BQ93098 351 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 THEGQ9P2T0 379 aa17.92■□□□□ 0.46
TPM1-211ENST00000558314 TANC1Q9C0D5 1861 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 C17orf102A2RUQ5 167 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 HAS3O00219 553 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 NBNO60934 754 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 BAIAP3O94812 1187 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 TGFB3P10600 412 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 WDR5P61964 334 aaKnown RBP17.91■□□□□ 0.46
TPM1-211ENST00000558314 DEFB103AP81534 67 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 MRPS9P82933 396 aaKnown RBP17.91■□□□□ 0.46
TPM1-211ENST00000558314 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
TPM1-211ENST00000558314 HIC1Q14526 733 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 CNKSR3Q6P9H4 555 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 SRBD1Q8N5C6 995 aaKnown RBP17.91■□□□□ 0.46
TPM1-211ENST00000558314 PHOSPHO2Q8TCD6 241 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 SPZ1Q9BXG8 430 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 PKD2L1Q9P0L9 805 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 SLC12A7Q9Y666 1083 aa17.91■□□□□ 0.46
TPM1-211ENST00000558314 H3BRB1 525 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 GTPBP6O43824 516 aaPredicted RBP17.9■□□□□ 0.46
TPM1-211ENST00000558314 ARHGEF15O94989 841 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 LGALS2P05162 132 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 SMIM10L2AP0DMW4 78 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 SMIM10L2BP0DMW5 78 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 GNAQP50148 359 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 GPNMBQ14956 572 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 TCTN1Q2MV58 587 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 ATP6V0A1Q93050 837 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 TMEM87BQ96K49 555 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 TSPYL2Q9H2G4 693 aaPredicted RBP17.9■□□□□ 0.46
TPM1-211ENST00000558314 TUT1Q9H6E5 874 aaKnown RBP17.9■□□□□ 0.46
TPM1-211ENST00000558314 MTUS1Q9ULD2 1270 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
TPM1-211ENST00000558314 EPOPA6NHQ4 379 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 FIBPO43427 364 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 CTSHP09668 335 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 NEDD9Q14511 834 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms