RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DEFB118Q96PH6 123 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 AMNQ9BXJ7 453 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 RAVER2Q9HCJ3 691 aaKnown RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ANO10Q9NW15 660 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CYP39A1Q9NYL5 469 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CTDP1Q9Y5B0 961 aaPredicted RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 FRMPD4Q14CM0 1322 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 PNMA6FA0A0J9YX94 578 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 ERICH4A6NGS2 130 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 MYO1CO00159 1063 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 ZBTB43O43298 467 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTF1-205ENST00000558298 COL6A1P12109 1028 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 EDNRBP24530 442 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 MCM3P25205 808 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 CCND3P30281 292 aaPredicted RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 ACTN2P35609 894 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 SLC16A2P36021 539 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 NOP2P46087 812 aaKnown RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 NKX3-2P78367 333 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 PLS1Q14651 629 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 BRD3Q15059 726 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 SYNE3Q6ZMZ3 975 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 SRLQ86TD4 932 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 EFCAB13Q8IY85 973 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 CPXCR1Q8N123 301 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 ZNF274Q96GC6 653 aaPredicted RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 AGBL1Q96MI9 1066 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 CEP89Q96ST8 783 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 UBXN6Q9BZV1 441 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 MRPL11Q9Y3B7 192 aaKnown RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.03□□□□□ -0.961e-7■■■■□ 22.8
RTF1-205ENST00000558298 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 RANBP2P49792 3224 aaKnown RBP9.03□□□□□ -0.96
RTF1-205ENST00000558298 CNTNAP5Q8WYK1 1306 aa9.03□□□□□ -0.96
RTF1-205ENST00000558298 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 OPLAHO14841 1288 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 FIBPO43427 364 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 CBFA2T2O43439 604 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 FARP2O94887 1054 aaPredicted RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 GOLGA8HP0CJ92 632 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 HSD17B4P51659 736 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 ELF2Q15723 593 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 RTN1Q16799 776 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 ANO6Q4KMQ2 910 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 MFSD14CQ5VZR4 134 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 Q6ZUG5 572 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 DPP9Q86TI2 863 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 DIS3LQ8TF46 1054 aaKnown RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 ZNF592Q92610 1267 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.97
RTF1-205ENST00000558298 CEP290O15078 2479 aa9.02□□□□□ -0.97
RTF1-205ENST00000558298 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 ESYT2A0FGR8 921 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 ASB14A6NK59 587 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 NFIBO00712 420 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 CPP00450 1065 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 ALAS1P13196 640 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 IFNAR1P17181 557 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 SFPQP23246 707 aaKnown RBP eCLIP9.01□□□□□ -0.97
RTF1-205ENST00000558298 RPS6P62753 249 aaKnown RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 NTRK3Q16288 839 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 CCDC174Q6PII3 467 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 ANKRD35Q8N283 1001 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 BRF1Q92994 677 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 RRP36Q96EU6 259 aaKnown RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 RNF26Q9BY78 433 aaPredicted RBP9.01□□□□□ -0.97
RTF1-205ENST00000558298 UBA5Q9GZZ9 404 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms