RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 SEC16BQ96JE7 1060 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PYM1Q9BRP8 204 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 OSBPL7Q9BZF2 842 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 EPB41L4AQ9HCS5 686 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PHF20L1A8MW92 1017 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 ITIH3Q06033 890 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 GFPT1Q06210 699 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 IFFO1Q0D2I5 559 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 UBE3CQ15386 1083 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PTPROQ16827 1216 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 GLE1Q53GS7 698 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 ZNF662Q6ZS27 426 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 FAM114A1Q8IWE2 563 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 TMTC2Q8N394 836 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 MIGA1Q8NAN2 632 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 RETREG2Q8NC44 543 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PROCA1Q8NCQ7 364 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 CASKIN2Q8WXE0 1202 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 SPDL1Q96EA4 605 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PURBQ96QR8 312 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 TANGO6Q9C0B7 1094 aa5.58□□□□□ -1.52
HMG20A-204ENST00000558288 PACSIN2Q9UNF0 486 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 NOVA2Q9UNW9 492 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 MYO5AQ9Y4I1 1855 aaKnown RBP5.58□□□□□ -1.52
HMG20A-204ENST00000558288 CASZ1Q86V15 1759 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PP2D1A8MPX8 630 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PLEKHA8P1O95397 391 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 UBA7P41226 1012 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PHKA1P46020 1223 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ATP2C1P98194 919 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ACCSLQ4AC99 568 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PPP4R3AQ6IN85 833 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PRR5LQ6MZQ0 368 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 FAM228AQ86W67 206 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TBC1D22AQ8WUA7 517 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PHF20Q9BVI0 1012 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ATP6V0A4Q9HBG4 840 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 LEMD3Q9Y2U8 911 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ECM29Q5VYK3 1845 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TNKSO95271 1327 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 IQCA1LA6NCM1 817 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PRLRP16471 622 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 CDC25CP30307 473 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 CCNHP51946 323 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TNNC1P63316 161 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ARID5AQ03989 594 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 EHHADHQ08426 723 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PDE4DQ08499 809 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 MAP3K12Q12852 859 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ZKSCAN8Q15776 578 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 CATIPQ7Z7H3 387 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 HELBQ8NG08 1087 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 WHAMMQ8TF30 809 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PIK3R5Q8WYR1 880 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TAF4BQ92750 862 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 STAMBPL1Q96FJ0 436 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 KIF9Q9HAQ2 790 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 NOD2Q9HC29 1040 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 GDF3Q9NR23 364 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ARHGAP20Q9P2F6 1191 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 MYH10P35580 1976 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 C5P01031 1676 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 MYH13Q9UKX3 1938 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 BICDL2A1A5D9 508 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 NBPF26B4DH59 902 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 PALMO75781 387 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TNFRSF8P28908 595 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 SLC1A4P43007 532 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ASIC1P78348 528 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 IRX1P78414 480 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 FSTL1Q12841 308 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 IFIT1BQ5T764 474 aaKnown RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 NBPF10Q6P3W6 841 aaKnown RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 C6orf89Q6UWU4 347 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 RUFY4Q6ZNE9 571 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TBC1D1Q86TI0 1168 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 NBPF15Q8N660 670 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 NSMCE1Q8WV22 266 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 SHISA4Q96DD7 197 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TLR10Q9BXR5 811 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 RNF41Q9H4P4 317 aaPredicted RBP5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TMBIM4Q9HC24 238 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 TACC3Q9Y6A5 838 aa5.57□□□□□ -1.52
HMG20A-204ENST00000558288 RASSF10A6NK89 507 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 LRRC53A6NM62 1247 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 RAD51CO43502 376 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 TRAPPC3O43617 180 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ATP6V1G2O95670 118 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 HSD17B3P37058 310 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 PPP2R2AP63151 447 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 KRT71Q3SY84 523 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 FAM133BQ5BKY9 247 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 KLHDC7AQ5VTJ3 777 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms