RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 DDX20Q9UHI6 824 aaKnown RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 WDR81Q562E7 1941 aa11.9□□□□□ -0.51
LRRC28-204ENST00000558172 IGLV3-22A0A075B6J6 115 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 FAM86B1E9PN63 330 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 EDIL3O43854 480 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
LRRC28-204ENST00000558172 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
LRRC28-204ENST00000558172 GJB1P08034 283 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 FAM86B2P0C5J1 330 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 RARBP10826 455 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 NEDD9Q14511 834 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 MTFR1Q15390 333 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 RILPL1Q5EBL4 403 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 CCDC62Q6P9F0 684 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 PLA2G4DQ86XP0 818 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-204ENST00000558172 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 KCNH7Q9NS40 1196 aa11.89□□□□□ -0.51
LRRC28-204ENST00000558172 MYH9P35579 1960 aaKnown RBP11.88□□□□□ -0.51
LRRC28-204ENST00000558172 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 GH1P01241 217 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-204ENST00000558172 SMPD1P17405 629 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 PRR16Q569H4 304 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 LHX8Q68G74 356 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 TBC1D22BQ9NU19 505 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
LRRC28-204ENST00000558172 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
LRRC28-204ENST00000558172 TCHHQ07283 1943 aa11.88□□□□□ -0.51
LRRC28-204ENST00000558172 NFASCO94856 1347 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 TBX3O15119 743 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 ARIH2O95376 493 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 SGPL1O95470 568 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 TDP2O95551 362 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 ARP10275 920 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 GJA9P57773 515 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 NUCB2P80303 420 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 RESTQ13127 1097 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 SEMA3FQ13275 785 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 LAMC2Q13753 1193 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 LY6KQ17RY6 165 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 TTC38Q5R3I4 469 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 DHX37Q8IY37 1157 aaKnown RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 EMID1Q96A84 441 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 DEFB118Q96PH6 123 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 ZNF577Q9BSK1 485 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 MLXIPQ9HAP2 919 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 AGO4Q9HCK5 861 aaKnown RBP11.87□□□□□ -0.51
LRRC28-204ENST00000558172 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 HTTP42858 3142 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 KAT6AQ92794 2004 aa11.87□□□□□ -0.51
LRRC28-204ENST00000558172 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 MSH4O15457 936 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 DYNC1LI2O43237 492 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 MARCH6O60337 910 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 ATP9AO75110 1047 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 GGPS1O95749 300 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 F13A1P00488 732 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 KCNA2P16389 499 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 UBA1P22314 1058 aaKnown RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 GJA8P48165 433 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 NKX3-2P78367 333 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 SP2Q02086 613 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 CELF3Q5SZQ8 465 aaKnown RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 METTL7BQ6UX53 244 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 RNF180Q86T96 592 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 OR6J1Q8NGC5 347 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 LENG9Q96B70 501 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 IPO9Q96P70 1041 aaKnown RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 RIT2Q99578 217 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
LRRC28-204ENST00000558172 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 OGDHLQ9ULD0 1010 aa11.86□□□□□ -0.51
LRRC28-204ENST00000558172 LAD1O00515 517 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ADCY6O43306 1168 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ZEB2O60315 1214 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 NEMFO60524 1076 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 BRD1O95696 1058 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 BMP15O95972 392 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms