RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 DDX49Q9Y6V7 483 aaKnown RBP8.85□□□□□ -0.99
SPG11-205ENST00000558080 SYNRGQ9UMZ2 1314 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 SZT2Q5T011 3432 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 MYADML2A6NDP7 307 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ADCY6O43306 1168 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ICAM1P05362 532 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 GOLGA8HP0CJ92 632 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ZNF543Q08ER8 600 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 KCNA10Q16322 511 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
SPG11-205ENST00000558080 CCDC144BQ3MJ40 725 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
SPG11-205ENST00000558080 FAM133AQ8N9E0 248 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 LBHD1Q9BQE6 289 aaPredicted RBP8.84□□□□□ -0.99
SPG11-205ENST00000558080 RANBP17Q9H2T7 1088 aaKnown RBP8.84□□□□□ -0.99
SPG11-205ENST00000558080 CPVLQ9H3G5 476 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ABHD16BQ9H3Z7 469 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
SPG11-205ENST00000558080 CYP39A1Q9NYL5 469 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 ZSWIM5Q9P217 1185 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 CTNNA3Q9UI47 895 aa8.84□□□□□ -0.99
SPG11-205ENST00000558080 KAT6AQ92794 2004 aa8.83□□□□□ -1
SPG11-205ENST00000558080 GBF1Q92538 1859 aa8.83□□□□□ -1
SPG11-205ENST00000558080 DOCK5Q9H7D0 1870 aa8.83□□□□□ -1
SPG11-205ENST00000558080 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.83□□□□□ -1
SPG11-205ENST00000558080 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
SPG11-205ENST00000558080 A0A1W2PQY0 241 aa8.83□□□□□ -1
SPG11-205ENST00000558080 ASB14A6NK59 587 aa8.83□□□□□ -1
SPG11-205ENST00000558080 DUSP11O75319 330 aaKnown RBP8.83□□□□□ -1
SPG11-205ENST00000558080 C6orf222P0C671 652 aaPredicted RBP8.83□□□□□ -1
SPG11-205ENST00000558080 ACLYP53396 1101 aa8.83□□□□□ -1
SPG11-205ENST00000558080 TLE2Q04725 743 aa8.83□□□□□ -1
SPG11-205ENST00000558080 BAATQ14032 418 aaPredicted RBP8.83□□□□□ -1
SPG11-205ENST00000558080 CCDC178Q5BJE1 867 aa8.83□□□□□ -1
SPG11-205ENST00000558080 NOL8Q76FK4 1167 aaKnown RBP8.83□□□□□ -1
SPG11-205ENST00000558080 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
SPG11-205ENST00000558080 IQCA1Q86XH1 822 aa8.83□□□□□ -1
SPG11-205ENST00000558080 DGKHQ86XP1 1220 aa8.83□□□□□ -1
SPG11-205ENST00000558080 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
SPG11-205ENST00000558080 TDHQ8IZJ6 230 aa8.83□□□□□ -1
SPG11-205ENST00000558080 PNMA1Q8ND90 353 aa8.83□□□□□ -1
SPG11-205ENST00000558080 KLHDC9Q8NEP7 349 aa8.83□□□□□ -1
SPG11-205ENST00000558080 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -1
SPG11-205ENST00000558080 ZSCAN10Q96SZ4 725 aaPredicted RBP8.83□□□□□ -1
SPG11-205ENST00000558080 UBA5Q9GZZ9 404 aa8.83□□□□□ -1
SPG11-205ENST00000558080 KATNBL1Q9H079 304 aa8.83□□□□□ -1
SPG11-205ENST00000558080 KAT14Q9H8E8 782 aa8.83□□□□□ -1
SPG11-205ENST00000558080 SCN5AQ14524 2016 aa8.83□□□□□ -1
SPG11-205ENST00000558080 ASTN1O14525 1302 aa8.82□□□□□ -1
SPG11-205ENST00000558080 LOC100996750A0A140TA64 210 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PTPDC1A2A3K4 754 aa8.82□□□□□ -1
SPG11-205ENST00000558080 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
SPG11-205ENST00000558080 NFIBO00712 420 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PQBP1O60828 265 aaKnown RBP8.82□□□□□ -1
SPG11-205ENST00000558080 SNHG28P0DPA3 235 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PTGS1P23219 599 aa8.82□□□□□ -1
SPG11-205ENST00000558080 CHMLP26374 656 aa8.82□□□□□ -1
SPG11-205ENST00000558080 BEX3Q00994 111 aa8.82□□□□□ -1
SPG11-205ENST00000558080 TNFAIP2Q03169 654 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PTH1RQ03431 593 aa8.82□□□□□ -1
SPG11-205ENST00000558080 KCNMA1Q12791 1236 aa8.82□□□□□ -1
SPG11-205ENST00000558080 SNX17Q15036 470 aa8.82□□□□□ -1
SPG11-205ENST00000558080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.82□□□□□ -1
SPG11-205ENST00000558080 GNASQ5JWF2 1037 aa8.82□□□□□ -1
SPG11-205ENST00000558080 CCSAPQ6IQ19 270 aaPredicted RBP8.82□□□□□ -1
SPG11-205ENST00000558080 ENAHQ8N8S7 591 aaPredicted RBP8.82□□□□□ -1
SPG11-205ENST00000558080 RUFY2Q8WXA3 655 aa8.82□□□□□ -1
SPG11-205ENST00000558080 BADQ92934 168 aa8.82□□□□□ -1
SPG11-205ENST00000558080 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
SPG11-205ENST00000558080 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
SPG11-205ENST00000558080 KRTAP4-6Q9BYQ5 205 aa8.82□□□□□ -1
SPG11-205ENST00000558080 KRT23Q9C075 422 aa8.82□□□□□ -1
SPG11-205ENST00000558080 UPF3AQ9H1J1 476 aaKnown RBP8.82□□□□□ -1
SPG11-205ENST00000558080 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
SPG11-205ENST00000558080 SPC25Q9HBM1 224 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
SPG11-205ENST00000558080 PDGFCQ9NRA1 345 aa8.82□□□□□ -1
SPG11-205ENST00000558080 TNKSO95271 1327 aa8.81□□□□□ -1
SPG11-205ENST00000558080 DYNC1LI2O43237 492 aaPredicted RBP8.81□□□□□ -1
SPG11-205ENST00000558080 ASGR1P07306 291 aa8.81□□□□□ -1
SPG11-205ENST00000558080 CALML3P27482 149 aa8.81□□□□□ -1
SPG11-205ENST00000558080 GJA9P57773 515 aa8.81□□□□□ -1
SPG11-205ENST00000558080 USH1GQ495M9 461 aa8.81□□□□□ -1
SPG11-205ENST00000558080 TMEM63BQ5T3F8 832 aa8.81□□□□□ -1
SPG11-205ENST00000558080 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
SPG11-205ENST00000558080 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
SPG11-205ENST00000558080 SLC30A10Q6XR72 485 aa8.81□□□□□ -1
SPG11-205ENST00000558080 RNF207Q6ZRF8 634 aa8.81□□□□□ -1
SPG11-205ENST00000558080 CYB5R4Q7L1T6 521 aa8.81□□□□□ -1
SPG11-205ENST00000558080 FBXO16Q8IX29 292 aaPredicted RBP8.81□□□□□ -1
SPG11-205ENST00000558080 PCSK9Q8NBP7 692 aaKnown RBP8.81□□□□□ -1
SPG11-205ENST00000558080 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
SPG11-205ENST00000558080 CLEC4DQ8WXI8 215 aa8.81□□□□□ -1
SPG11-205ENST00000558080 ANKS1AQ92625 1134 aa8.81□□□□□ -1
SPG11-205ENST00000558080 UBAC1Q9BSL1 405 aa8.81□□□□□ -1
SPG11-205ENST00000558080 AP5M1Q9H0R1 490 aa8.81□□□□□ -1
SPG11-205ENST00000558080 VAT1LQ9HCJ6 419 aa8.81□□□□□ -1
SPG11-205ENST00000558080 STARD7Q9NQZ5 370 aa8.81□□□□□ -1
SPG11-205ENST00000558080 SCN10AQ9Y5Y9 1956 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms