RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 FAM167BQ9BTA0 163 aa12□□□□□ -0.49
CCDC85C-207ENST00000557769 LIMA1Q9UHB6 759 aaKnown RBP12□□□□□ -0.49
CCDC85C-207ENST00000557769 REXO2Q9Y3B8 237 aaKnown RBP12□□□□□ -0.49
CCDC85C-207ENST00000557769 UTYO14607 1347 aa12□□□□□ -0.49
CCDC85C-207ENST00000557769 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
CCDC85C-207ENST00000557769 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
CCDC85C-207ENST00000557769 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
CCDC85C-207ENST00000557769 MAGOHBQ96A72 148 aaKnown RBP12□□□□□ -0.49
CCDC85C-207ENST00000557769 DNAJC17Q9NVM6 304 aaKnown RBP12□□□□□ -0.49
CCDC85C-207ENST00000557769 NIP7Q9Y221 180 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC85C-207ENST00000557769 PPP1R37O75864 691 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 IL6STP40189 918 aaPredicted RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 DHX9Q08211 1270 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 STK4Q13043 487 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 PEX26Q7Z412 305 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 PNPLA7Q6ZV29 1317 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 MPHOSPH10O00566 681 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 CIAO1O76071 339 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 GNAT2P19087 354 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 EEF1GP26641 437 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 VPS41P49754 854 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 HERC4Q5GLZ8 1057 aaPredicted RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 CDKAL1Q5VV42 579 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 DISC1Q9NRI5 854 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 PSMD14O00487 310 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 RPS6KA4O75676 772 aa11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 SARSP49591 514 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 ELAC2Q9BQ52 826 aaKnown RBP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC85C-207ENST00000557769 GLI1P08151 1106 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 ASIC2Q16515 512 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CRNKL1Q9BZJ0 848 aaKnown RBP11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 VIPAS39Q9H9C1 493 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 FOXP2O15409 715 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CALRP27797 417 aaKnown RBP11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CNNM4Q6P4Q7 775 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 VPS36Q86VN1 386 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 SGMS1Q86VZ5 419 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 PPP1R12CQ9BZL4 782 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 COPB2P35606 906 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 GJC1P36383 396 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 KRT79Q5XKE5 535 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 CCDC63Q8NA47 563 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 TMEM60Q9H2L4 133 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 SLC40A1Q9NP59 571 aa11.98□□□□□ -0.49
CCDC85C-207ENST00000557769 ELF1P32519 619 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 PLTPP55058 493 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CCDC13Q8IYE1 715 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 GJA10Q969M2 543 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 LRRC45Q96CN5 670 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 UBXN6Q9BZV1 441 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 ARPP21Q9UBL0 812 aaPredicted RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 LAMB2P55268 1798 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 ENO4A6NNW6 628 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CALM1P0DP23 149 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CALM2P0DP24 149 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CALM3P0DP25 149 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 SARNPP82979 210 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 LRRC14Q15048 493 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 SLC15A2Q16348 729 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 RUFY4Q6ZNE9 571 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 RDH13Q8NBN7 331 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 ANKRD62A6NC57 917 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 PDE8AO60658 829 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 PAX7P23759 505 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 CCNE1P24864 410 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 BRD2P25440 801 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 SESN3P58005 492 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 MAEAQ7L5Y9 396 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-207ENST00000557769 GNPATO15228 680 aa11.96□□□□□ -0.49
CCDC85C-207ENST00000557769 DAPK3O43293 454 aa11.96□□□□□ -0.49
CCDC85C-207ENST00000557769 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.49
CCDC85C-207ENST00000557769 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
CCDC85C-207ENST00000557769 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
CCDC85C-207ENST00000557769 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms