RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TLE2Q04725 743 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 STXBP2Q15833 593 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 TAPT1Q6NXT6 567 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
LINC00648-204ENST00000557749 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 SPZ1Q9BXG8 430 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 RIOX1Q9H6W3 641 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 TMEM39AQ9NV64 488 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 LRRC37A2A6NM11 1700 aa13.21□□□□□ -0.3
LINC00648-204ENST00000557749 ASTN1O14525 1302 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 ARVCFO00192 962 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
LINC00648-204ENST00000557749 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
LINC00648-204ENST00000557749 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
LINC00648-204ENST00000557749 REC8O95072 547 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 RAG1P15918 1043 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 SMPD1P17405 629 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 SYTL5Q8TDW5 730 aaPredicted RBP13.2□□□□□ -0.3
LINC00648-204ENST00000557749 RRP36Q96EU6 259 aaKnown RBP13.2□□□□□ -0.3
LINC00648-204ENST00000557749 FAM117AQ9C073 453 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
LINC00648-204ENST00000557749 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
LINC00648-204ENST00000557749 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
LINC00648-204ENST00000557749 EIF3JO75822 258 aaKnown RBP13.19□□□□□ -0.3
LINC00648-204ENST00000557749 STAM2O75886 525 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 CFBP00751 764 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 HSD17B4P51659 736 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 RCAN1P53805 252 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 TSGA10IPQ3SY00 556 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 STOX1Q6ZVD7 989 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 CUL5Q93034 780 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
LINC00648-204ENST00000557749 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
LINC00648-204ENST00000557749 LCTP09848 1927 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
LINC00648-204ENST00000557749 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
LINC00648-204ENST00000557749 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
LINC00648-204ENST00000557749 ANTXR2P58335 489 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 FUT2Q10981 343 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 SGMS1Q86VZ5 419 aa13.18□□□□□ -0.3
LINC00648-204ENST00000557749 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
LINC00648-204ENST00000557749 ADCY6O43306 1168 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 GH1P01241 217 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 TGFB3P10600 412 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 CDK7P50613 346 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 FGD1P98174 961 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 FPGSQ05932 587 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
LINC00648-204ENST00000557749 ITGA7Q13683 1181 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 CXCL17Q6UXB2 119 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
LINC00648-204ENST00000557749 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 PIGSQ96S52 555 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
LINC00648-204ENST00000557749 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
LINC00648-204ENST00000557749 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 A6NJR5 290 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 CTAGE5O15320 804 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 TIMP1P01033 207 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 NR3C2P08235 984 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 PSMA5P28066 241 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 CCND2P30279 289 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 BEX3Q00994 111 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 FAAP100Q0VG06 881 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00648-204ENST00000557749 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
LINC00648-204ENST00000557749 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 BADQ92934 168 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 HLA-CQ95604 372 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
LINC00648-204ENST00000557749 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
LINC00648-204ENST00000557749 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms