RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 ZEB2O60315 1214 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 NR3C2P08235 984 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TGFB3P10600 412 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 CLCN1P35523 988 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TNFAIP2Q03169 654 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 STK3Q13188 491 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
CNIH1-206ENST00000557659 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TRPV1Q8NER1 839 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TAAR1Q96RJ0 339 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 KIF2CQ99661 725 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
CNIH1-206ENST00000557659 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
CNIH1-206ENST00000557659 HTATIP2Q9BUP3 242 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
CNIH1-206ENST00000557659 ASTN1O14525 1302 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 MAFGO15525 162 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 NKX3-2P78367 333 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 PGM5Q15124 567 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 PKN1Q16512 942 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 ME3Q16798 604 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 DUSP28Q4G0W2 176 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 VSIG10LQ86VR7 867 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 PHKBQ93100 1093 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
CNIH1-206ENST00000557659 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
CNIH1-206ENST00000557659 MCM3APO60318 1980 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 POTEMA6NI47 508 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 GJA9P57773 515 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
CNIH1-206ENST00000557659 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
CNIH1-206ENST00000557659 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 REXO1Q8N1G1 1221 aaKnown RBP13.15□□□□□ -0.3
CNIH1-206ENST00000557659 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
CNIH1-206ENST00000557659 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
CNIH1-206ENST00000557659 HTTP42858 3142 aa13.15□□□□□ -0.31
CNIH1-206ENST00000557659 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
CNIH1-206ENST00000557659 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 KPNA6O60684 536 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 CABYRO75952 493 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 CPT1AP50416 773 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 NLRP5P59047 1200 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 TRIM29Q14134 588 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
CNIH1-206ENST00000557659 FBXO16Q8IX29 292 aaPredicted RBP13.14□□□□□ -0.31
CNIH1-206ENST00000557659 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
CNIH1-206ENST00000557659 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 PCDHA6Q9UN73 950 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
CNIH1-206ENST00000557659 PCDHA8Q9Y5H6 950 aa13.14□□□□□ -0.31
CNIH1-206ENST00000557659 SYNRGQ9UMZ2 1314 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 FIBPO43427 364 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 TXNP10599 105 aaKnown RBP13.13□□□□□ -0.31
CNIH1-206ENST00000557659 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
CNIH1-206ENST00000557659 LRRC41Q15345 812 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
CNIH1-206ENST00000557659 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
CNIH1-206ENST00000557659 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
CNIH1-206ENST00000557659 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
CNIH1-206ENST00000557659 ADAMTS4O75173 837 aa13.12□□□□□ -0.31
CNIH1-206ENST00000557659 GH1P01241 217 aa13.12□□□□□ -0.31
CNIH1-206ENST00000557659 OATP04181 439 aa13.12□□□□□ -0.31
CNIH1-206ENST00000557659 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
CNIH1-206ENST00000557659 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
CNIH1-206ENST00000557659 SMPD1P17405 629 aa13.12□□□□□ -0.31
CNIH1-206ENST00000557659 ICAM3P32942 547 aa13.12□□□□□ -0.31
CNIH1-206ENST00000557659 NEDD9Q14511 834 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms