RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 MICALL1Q8N3F8 863 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 ARNTL2Q8WYA1 636 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 WNT8BQ93098 351 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 KRT23Q9C075 422 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 PALM3A6NDB9 673 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 CFBP00751 764 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 CHMP4BP1P59074 171 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 DEFB103AP81534 67 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 SP2Q02086 613 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
HNRNPC-230ENST00000557201 ABHD14A-ACY1A0A1B0GW23 586 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 TLL1O43897 1013 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 GJB5O95377 273 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 ZNF286BP0CG31 522 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 CHMLP26374 656 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 KCNJ6P48051 423 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 ZNF200P98182 395 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 PTK7Q13308 1070 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 MFSD10Q14728 455 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 KIAA0753Q2KHM9 967 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 AAK1Q2M2I8 961 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 CELF3Q5SZQ8 465 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 CYB5R4Q7L1T6 521 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 SAMD3Q8N6K7 520 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 IL31RAQ8NI17 732 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 KATNAL1Q9BW62 490 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 RAPGEFL1Q9UHV5 662 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 COG5Q9UP83 839 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 COL4A4P53420 1690 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-230ENST00000557201 ZBTB5O15062 677 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 PPFIA4O75335 1185 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 HOXC8P31273 242 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 PGM5Q15124 567 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 ZNF618Q5T7W0 954 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 DHX37Q8IY37 1157 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 IL27Q8NEV9 243 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 UBAC1Q9BSL1 405 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 C16orf70Q9BSU1 422 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 RIOX1Q9H6W3 641 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 LMCD1Q9NZU5 365 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 MYH6P13533 1939 aa12.44□□□□□ -0.42
HNRNPC-230ENST00000557201 CYTH3O43739 400 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 DHX16O60231 1041 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 TGFB3P10600 412 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 UBA1P22314 1058 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 ERVK-21P61565 698 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 SKIV2LQ15477 1246 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 RUFY2Q8WXA3 655 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 GPKOWQ92917 476 aaPredicted RBP eCLIP12.43□□□□□ -0.425e-6■■□□□ 13.3
HNRNPC-230ENST00000557201 RAD9AQ99638 391 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 SUGCTQ9HAC7 445 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 NCOR1O75376 2440 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 FRMPD4Q14CM0 1322 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 EFCAB14O75071 495 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 GGPS1O95749 300 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 TROAPQ12815 778 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 IKBKEQ14164 716 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 GRM4Q14833 912 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 HLA-CQ95604 372 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 SPATA33Q96N06 139 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 SENP2Q9HC62 589 aa12.43□□□□□ -0.42
HNRNPC-230ENST00000557201 MYH7BA7E2Y1 1941 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 LGR5O75473 907 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 CYP21A2P08686 494 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.424e-7■■■■□ 21.4
HNRNPC-230ENST00000557201 GDPD5Q8WTR4 605 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 PIGSQ96S52 555 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
HNRNPC-230ENST00000557201 TAF6LQ9Y6J9 622 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms