RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 TNPO1Q92973 898 aaKnown RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 MEIS1O00470 390 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 TBX3O15119 743 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 FIBPO43427 364 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 EDIL3O43854 480 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 ADCY3O60266 1144 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 NEMFO60524 1076 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 LBX1P52954 281 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 CAP1Q01518 475 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
TMEM260-213ENST00000556929 MTMR1Q13613 665 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 NBR1Q14596 966 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 STK38Q15208 465 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 CALCRLQ16602 461 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 CCL14Q16627 93 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 PRR16Q569H4 304 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 SLFN12Q8IYM2 578 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-213ENST00000556929 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-213ENST00000556929 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
TMEM260-213ENST00000556929 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
TMEM260-213ENST00000556929 IGLV3-22A0A075B6J6 115 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 YEATS4O95619 227 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 TGFB3P10600 412 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ITGB5P18084 799 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ICAM3P32942 547 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 PTGDRQ13258 359 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ACVR2BQ13705 512 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 TTLL4Q14679 1199 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 FBXO16Q8IX29 292 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 CYP2W1Q8TAV3 490 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 SPATA32Q96LK8 384 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ZNF577Q9BSK1 485 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 ZHX1Q9UKY1 873 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-213ENST00000556929 PTPN22Q9Y2R2 807 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 CLIC4Q9Y696 253 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 MRVI1Q9Y6F6 885 aa11.01□□□□□ -0.65
TMEM260-213ENST00000556929 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 WNT7AO00755 349 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 MSH4O15457 936 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 ATMINO43313 823 aaPredicted RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 SLC37A4O43826 429 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 PPP6R2O75170 966 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 RGS20O76081 388 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 HMGCRP04035 888 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 OR52Z1P0C646 297 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 ARP10275 920 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 CYP2C19P33261 490 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 PRPHP41219 470 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 NEDD9Q14511 834 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 SLC39A14Q15043 492 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 LINC00301Q8NCQ3 95 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 KCNG4Q8TDN1 519 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 SCFD2Q8WU76 684 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 TRIB2Q92519 343 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 LENG9Q96B70 501 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 FAM20AQ96MK3 541 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 AGO4Q9HCK5 861 aaKnown RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 TBC1D22BQ9NU19 505 aa11□□□□□ -0.65
TMEM260-213ENST00000556929 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 MORC2Q9Y6X9 1032 aaPredicted RBP11□□□□□ -0.65
TMEM260-213ENST00000556929 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
TMEM260-213ENST00000556929 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
TMEM260-213ENST00000556929 SPTLC2O15270 562 aa10.99□□□□□ -0.65
TMEM260-213ENST00000556929 IGHA2P01877 340 aa10.99□□□□□ -0.65
TMEM260-213ENST00000556929 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
TMEM260-213ENST00000556929 ELNP15502 786 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms