RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RRP36Q96EU6 259 aaKnown RBP26.12■■□□□ 1.77
ACTN1-220ENST00000556433 MLXIPQ9HAP2 919 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 SCN5AQ14524 2016 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 SLC27A2O14975 620 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 SELPP16109 830 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 UBA1P22314 1058 aaKnown RBP26.11■■□□□ 1.77
ACTN1-220ENST00000556433 IGFBP4P22692 258 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 ADGRE1Q14246 886 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 PPP2R2DQ66LE6 453 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 DHX38Q92620 1227 aaKnown RBP26.11■■□□□ 1.77
ACTN1-220ENST00000556433 LZTS2Q9BRK4 669 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 SPZ1Q9BXG8 430 aa26.11■■□□□ 1.77
ACTN1-220ENST00000556433 CCDC69A6NI79 296 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 HOXD8P13378 290 aaPredicted RBP26.1■■□□□ 1.77
ACTN1-220ENST00000556433 SMARCA1P28370 1054 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 PHOSPHO2Q8TCD6 241 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 TMEM87BQ96K49 555 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 SLC9A7Q96T83 725 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 UNC80Q8N2C7 3258 aa26.1■■□□□ 1.77
ACTN1-220ENST00000556433 SH2B2O14492 632 aaPredicted RBP26.09■■□□□ 1.77
ACTN1-220ENST00000556433 GNAQP50148 359 aa26.09■■□□□ 1.77
ACTN1-220ENST00000556433 CREB3L3Q68CJ9 461 aa26.09■■□□□ 1.77
ACTN1-220ENST00000556433 LRRC8DQ7L1W4 858 aa26.09■■□□□ 1.77
ACTN1-220ENST00000556433 SEC63Q9UGP8 760 aaKnown RBP26.09■■□□□ 1.77
ACTN1-220ENST00000556433 MYH7BA7E2Y1 1941 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 TRIP12Q14669 1992 aaPredicted RBP26.08■■□□□ 1.77
ACTN1-220ENST00000556433 MRPS9P82933 396 aaKnown RBP26.08■■□□□ 1.77
ACTN1-220ENST00000556433 PTK7Q13308 1070 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 COL9A3Q14050 684 aaPredicted RBP26.08■■□□□ 1.77
ACTN1-220ENST00000556433 GPNMBQ14956 572 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 NECTIN1Q15223 517 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 GNPTABQ3T906 1256 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 SRBD1Q8N5C6 995 aaKnown RBP26.08■■□□□ 1.77
ACTN1-220ENST00000556433 SMARCC2Q8TAQ2 1214 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 CUL5Q93034 780 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 BCAS3Q9H6U6 928 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 ANO2Q9NQ90 1003 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 RTEL1Q9NZ71 1219 aa26.08■■□□□ 1.77
ACTN1-220ENST00000556433 STAM2O75886 525 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 BAIAP3O94812 1187 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 PLEKHA8P1O95397 391 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 CKBP12277 381 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 ZNF200P98182 395 aaPredicted RBP26.07■■□□□ 1.76
ACTN1-220ENST00000556433 RBL2Q08999 1139 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 USP17L6PQ6QN14 398 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 C16orf70Q9BSU1 422 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 FRMPD4Q14CM0 1322 aa26.07■■□□□ 1.76
ACTN1-220ENST00000556433 PARNO95453 639 aaKnown RBP26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CA3P07451 260 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CALM1P0DP23 149 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CALM2P0DP24 149 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CALM3P0DP25 149 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 RXRAP19793 462 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 ICAM3P32942 547 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 LIFRP42702 1097 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CCDC85BQ15834 202 aaPredicted RBP26.06■■□□□ 1.76
ACTN1-220ENST00000556433 HERC6Q8IVU3 1022 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 CMTR1Q8N1G2 835 aaKnown RBP26.06■■□□□ 1.76
ACTN1-220ENST00000556433 INPP4AQ96PE3 977 aaPredicted RBP26.06■■□□□ 1.76
ACTN1-220ENST00000556433 PRDM6Q9NQX0 595 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 GBF1Q92538 1859 aa26.06■■□□□ 1.76
ACTN1-220ENST00000556433 TET1Q8NFU7 2136 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 SPATA31C2B4DYI2 1134 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 KIF28PB7ZC32 967 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 KCNJ6P48051 423 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 NEDD9Q14511 834 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 HIC1Q14526 733 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 LRRC2Q9BYS8 371 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 SLC12A7Q9Y666 1083 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 EYSQ5T1H1 3165 aa26.05■■□□□ 1.76
ACTN1-220ENST00000556433 PIK3CDO00329 1044 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 NOP56O00567 594 aaKnown RBP26.04■■□□□ 1.76
ACTN1-220ENST00000556433 MEIS2O14770 477 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 NBNO60934 754 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 TRIM71Q2Q1W2 868 aaKnown RBP26.04■■□□□ 1.76
ACTN1-220ENST00000556433 SKAP1Q86WV1 359 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 RAB11FIP4Q86YS3 637 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 WNT8BQ93098 351 aa26.04■■□□□ 1.76
ACTN1-220ENST00000556433 H3BRB1 525 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 FIBPO43427 364 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 CXCL10P02778 98 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 SEMA3FQ13275 785 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 BMP2KLQ5H9B9 411 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 ZNF618Q5T7W0 954 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 XRRA1Q6P2D8 792 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 CNKSR3Q6P9H4 555 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 METTL7BQ6UX53 244 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 CYFIP1Q7L576 1253 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 SYMPKQ92797 1274 aaKnown RBP26.03■■□□□ 1.76
ACTN1-220ENST00000556433 TUT1Q9H6E5 874 aaKnown RBP26.03■■□□□ 1.76
ACTN1-220ENST00000556433 CERS4Q9HA82 394 aa26.03■■□□□ 1.76
ACTN1-220ENST00000556433 PRUNE2Q8WUY3 3088 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 LGALS2P05162 132 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 PCNX4Q63HM2 1172 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 CENPQQ7L2Z9 268 aaPredicted RBP26.02■■□□□ 1.76
ACTN1-220ENST00000556433 CCDC82Q8N4S0 544 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 FANCBQ8NB91 859 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 USP26Q9BXU7 913 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 PSTPIP2Q9H939 334 aa26.02■■□□□ 1.76
ACTN1-220ENST00000556433 TANC1Q9C0D5 1861 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms