RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 CDC27P30260 824 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 PSEN2P49810 448 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 SMAD3P84022 425 aaKnown RBP17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 FGD1P98174 961 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 LAMC2Q13753 1193 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 GDF6Q6KF10 455 aaPredicted RBP17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 PSRC1Q6PGN9 363 aaPredicted RBP17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 Q6ZUG5 572 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 GUCD1Q96NT3 240 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 GRXCR1A8MXD5 290 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 SUPT20HL2P0C7V6 817 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 FUT2Q10981 343 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 MFSD10Q14728 455 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 KCNV1Q6PIU1 500 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 BRF1Q92994 677 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 INPP4AQ96PE3 977 aaPredicted RBP17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 PSTPIP2Q9H939 334 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 NOD1Q9Y239 953 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 TELO2Q9Y4R8 837 aa17.09■□□□□ 0.33
EFCAB11-207ENST00000555608 REC8O95072 547 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 F2P00734 622 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 PTGISQ16647 500 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 VWCEQ96DN2 955 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 PPP4R2Q9NY27 417 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 CXXC1Q9P0U4 656 aaPredicted RBP17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
EFCAB11-207ENST00000555608 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 FIBPO43427 364 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 RPS6KB1P23443 525 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 ICAM3P32942 547 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 NAPAP54920 295 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 SP4Q02446 784 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 CYFIP1Q7L576 1253 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 DHX38Q92620 1227 aaKnown RBP17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 KATNAL1Q9BW62 490 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 GTF2IRD1Q9UHL9 959 aa17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
EFCAB11-207ENST00000555608 UNC80Q8N2C7 3258 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 SPATA31C2B4DYI2 1134 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 HAS3O00219 553 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 STAM2O75886 525 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 FGBP02675 491 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 LGALS2P05162 132 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 TGFB3P10600 412 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 DNAJB2P25686 324 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 PBX2P40425 430 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 SESTD1Q86VW0 696 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 HERVK_113Q902F9 699 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 PKD2L1Q9P0L9 805 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
EFCAB11-207ENST00000555608 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 NID2Q14112 1375 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 SPDYE3A6NKU9 549 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 ZBBXA8MT70 800 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 STXBP3O00186 592 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 HIC1Q14526 733 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
EFCAB11-207ENST00000555608 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 IQCF3P0C7M6 154 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 ADCY7P51828 1080 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 RCAN1P53805 252 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 BFSP2Q13515 415 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 NEDD9Q14511 834 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 METTL7BQ6UX53 244 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 NLRX1Q86UT6 975 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
EFCAB11-207ENST00000555608 TET1Q8NFU7 2136 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms