RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
TDP1-212ENST00000555565 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
TDP1-212ENST00000555565 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
TDP1-212ENST00000555565 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 WNT8BQ93098 351 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
TDP1-212ENST00000555565 KRT23Q9C075 422 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 PRKAG3Q9UGI9 489 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 SIP14410 1827 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 BAZ2BQ9UIF8 2168 aaKnown RBP12.62□□□□□ -0.39
TDP1-212ENST00000555565 CFAP54Q96N23 3096 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
TDP1-212ENST00000555565 CHMLP26374 656 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
TDP1-212ENST00000555565 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 TBC1D5Q92609 795 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 UBAC1Q9BSL1 405 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 INSL6Q9Y581 213 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 RAD50Q92878 1312 aa12.61□□□□□ -0.39
TDP1-212ENST00000555565 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
TDP1-212ENST00000555565 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
TDP1-212ENST00000555565 PTH1RQ03431 593 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 PDE4DQ08499 809 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 IKBKEQ14164 716 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 HIC1Q14526 733 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 SEC23AQ15436 765 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 EPC2Q52LR7 807 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 IFIT1BQ5T764 474 aaKnown RBP12.6□□□□□ -0.39
TDP1-212ENST00000555565 IER5LQ5T953 404 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 PRSS33Q8NF86 280 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
TDP1-212ENST00000555565 GTF2IRD1Q9UHL9 959 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 ABCB11O95342 1321 aa12.6□□□□□ -0.39
TDP1-212ENST00000555565 TECTAO75443 2155 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 H3BNC9 293 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 EFCAB14O75071 495 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 MMP3P08254 477 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 CYP21A2P08686 494 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 CTC1Q2NKJ3 1217 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
TDP1-212ENST00000555565 TCEAL5Q5H9L2 206 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
TDP1-212ENST00000555565 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 MFSD14AQ96MC6 490 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
TDP1-212ENST00000555565 MAF1Q9H063 256 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 COL20A1Q9P218 1284 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 TAF6LQ9Y6J9 622 aa12.59□□□□□ -0.39
TDP1-212ENST00000555565 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 KLRF2D3W0D1 207 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
TDP1-212ENST00000555565 DLX2Q07687 328 aaPredicted RBP12.58□□□□□ -0.4
TDP1-212ENST00000555565 BMP8AQ7Z5Y6 402 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 MAD2L2Q9UI95 211 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 MUTYHQ9UIF7 546 aa12.58□□□□□ -0.4
TDP1-212ENST00000555565 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 B4DLN1 442 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 HAS3O00219 553 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 OPLAHO14841 1288 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 SGSM2O43147 1006 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 ST18O60284 1047 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 LGR5O75473 907 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 MRPL12P52815 198 aaKnown RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 TCF15Q12870 199 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 TRDNQ13061 729 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 PTK7Q13308 1070 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 PTPROQ16827 1216 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 LY6KQ17RY6 165 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 TIGD5Q53EQ6 642 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms