RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 GUCY2CP25092 1073 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 TDRD12Q587J7 1177 aaKnown RBP18.34■□□□□ 0.53
PCNX1-209ENST00000554879 LCMT1Q9UIC8 334 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 AP5Z1O43299 807 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
PCNX1-209ENST00000554879 MRIQ9BWK5 157 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 GLIS2Q9BZE0 524 aaPredicted RBP18.34■□□□□ 0.53
PCNX1-209ENST00000554879 COL4A1P02462 1669 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 POTEB3A0JP26 581 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 ARHGEF35A5YM69 484 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 TRIM49BA6NDI0 452 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 POTECB2RU33 542 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 E9PMD0 336 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-209ENST00000554879 USP14P54578 494 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 RNF187Q5TA31 235 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-209ENST00000554879 POTEBQ6S5H4 581 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 KIAA1328Q86T90 577 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 KCNJ18B7U540 433 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 ZSCAN12O43309 604 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 SMARCA1P28370 1054 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 KCNJ12Q14500 433 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-209ENST00000554879 PANK4Q9NVE7 773 aa18.33■□□□□ 0.53
PCNX1-209ENST00000554879 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 MYCT1Q8N699 235 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 KCNF1Q9H3M0 494 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 FEM1BQ9UK73 627 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 KDM3AQ9Y4C1 1321 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 ERLIN1O75477 346 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 AP3B2Q13367 1082 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 MIER3Q7Z3K6 550 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 MCF2L2Q86YR7 1114 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 GOLGA5Q8TBA6 731 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 YY1AP1Q9H869 796 aa18.33■□□□□ 0.52
PCNX1-209ENST00000554879 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 A0A087X0B3 334 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ERCC5P28715 1186 aaPredicted RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ARID5AQ03989 594 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ZNF658Q5TYW1 1059 aaPredicted RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 KRT26Q7Z3Y9 468 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ROBO3Q96MS0 1386 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 RPS12P25398 132 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 CCDC144BQ3MJ40 725 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ENOX1Q8TC92 643 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 BAG1Q99933 345 aaPredicted RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 TUBE1Q9UJT0 475 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 GCNT3O95395 438 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 MCTP2Q6DN12 878 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 RBM43Q6ZSC3 357 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 APOBEC3FQ8IUX4 373 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 LRRC8AQ8IWT6 810 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 PIGOQ8TEQ8 1089 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
PCNX1-209ENST00000554879 ABCB11O95342 1321 aa18.32■□□□□ 0.52
PCNX1-209ENST00000554879 AKR1B15C9JRZ8 316 aaPredicted RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 FAM26FQ5R3K3 315 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 NCAPG2Q86XI2 1143 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 CTIFO43310 598 aaKnown RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 POTEIP0CG38 1075 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 GNG11P61952 73 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 POTEGQ6S5H5 508 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 DAGLBQ8NCG7 672 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 PRCPP42785 496 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 NAA25Q14CX7 972 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 DCAF17Q5H9S7 520 aaPredicted RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 SEPT11Q9NVA2 429 aaKnown RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 CPSF2Q9P2I0 782 aaKnown RBP18.31■□□□□ 0.52
PCNX1-209ENST00000554879 MYH7P12883 1935 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 LMNB1P20700 586 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 PEX19P40855 299 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 TBC1D5Q92609 795 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 CUEDC2Q9H467 287 aa18.31■□□□□ 0.52
PCNX1-209ENST00000554879 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
PCNX1-209ENST00000554879 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.3■□□□□ 0.52
PCNX1-209ENST00000554879 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 DDX12PQ92771 950 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 BHMT2Q9H2M3 363 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 TMX2Q9Y320 296 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 PLA2G4BP0C869 781 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 DPF2Q92785 391 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
PCNX1-209ENST00000554879 LZTFL1Q9NQ48 299 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 SNRNP48Q6IEG0 339 aaKnown RBP18.3■□□□□ 0.52
PCNX1-209ENST00000554879 NLRX1Q86UT6 975 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms