RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 PPM1EQ8WY54 764 aa18.15■□□□□ 0.5
GABRB3-207ENST00000554722 KAT2BQ92831 832 aa18.15■□□□□ 0.5
GABRB3-207ENST00000554722 RRP36Q96EU6 259 aaKnown RBP18.15■□□□□ 0.5
GABRB3-207ENST00000554722 YBX2Q9Y2T7 364 aaKnown RBP18.15■□□□□ 0.5
GABRB3-207ENST00000554722 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
GABRB3-207ENST00000554722 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
GABRB3-207ENST00000554722 MYO9BQ13459 2157 aa18.15■□□□□ 0.5
GABRB3-207ENST00000554722 MEIS2O14770 477 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 ACTN1P12814 892 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 ATP2A2P16615 1042 aaKnown RBP18.14■□□□□ 0.49
GABRB3-207ENST00000554722 IGFBP4P22692 258 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 RFC2P35250 354 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 CHMP4BP1P59074 171 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 MRPS9P82933 396 aaKnown RBP18.14■□□□□ 0.49
GABRB3-207ENST00000554722 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
GABRB3-207ENST00000554722 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 MICU3Q86XE3 530 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 PCDHA11Q9Y5I1 949 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
GABRB3-207ENST00000554722 PITPNM1O00562 1244 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 RABGGTBP53611 331 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 TRAF1Q13077 416 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 BFSP2Q13515 415 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 CTAGE1Q96RT6 745 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 PTPRSQ13332 1948 aa18.13■□□□□ 0.49
GABRB3-207ENST00000554722 CALM1P0DP23 149 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 CALM2P0DP24 149 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 CALM3P0DP25 149 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 CCND2P30279 289 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 GNAQP50148 359 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 SEMA3FQ13275 785 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 ADGRE1Q14246 886 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 HSDL1Q3SXM5 330 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 MYSM1Q5VVJ2 828 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 KCNB2Q92953 911 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 EMID1Q96A84 441 aaPredicted RBP18.12■□□□□ 0.49
GABRB3-207ENST00000554722 RTEL1Q9NZ71 1219 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 TELO2Q9Y4R8 837 aa18.12■□□□□ 0.49
GABRB3-207ENST00000554722 GGPS1O95749 300 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 CELF3Q5SZQ8 465 aaKnown RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 GDF6Q6KF10 455 aaPredicted RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 DHX37Q8IY37 1157 aaKnown RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 CCDC155Q8N6L0 562 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 ATXN2LQ8WWM7 1075 aaKnown RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 THEGQ9P2T0 379 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
GABRB3-207ENST00000554722 SNX14Q9Y5W7 946 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 KAT6AQ92794 2004 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 TRANK1O15050 2925 aa18.11■□□□□ 0.49
GABRB3-207ENST00000554722 PIK3CDO00329 1044 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 ZNF286BP0CG31 522 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
GABRB3-207ENST00000554722 CDC27P30260 824 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 HSPA4P34932 840 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 FUT2Q10981 343 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 LAMC2Q13753 1193 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 CCDC85BQ15834 202 aaPredicted RBP18.1■□□□□ 0.49
GABRB3-207ENST00000554722 DGKDQ16760 1214 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 UBE2SQ16763 222 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 PPTC7Q8NI37 304 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 ALG1Q9BT22 464 aa18.1■□□□□ 0.49
GABRB3-207ENST00000554722 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
GABRB3-207ENST00000554722 MYOGP15173 224 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 HIC1Q14526 733 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 PTGISQ16647 500 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 PHOSPHO2Q8TCD6 241 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
GABRB3-207ENST00000554722 SLC9A7Q96T83 725 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 HDAC6Q9UBN7 1215 aa18.09■□□□□ 0.49
GABRB3-207ENST00000554722 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 HAS3O00219 553 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 ZBTB43O43298 467 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 HOXD8P13378 290 aaPredicted RBP18.08■□□□□ 0.48
GABRB3-207ENST00000554722 ICAM3P32942 547 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 PSEN2P49810 448 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 KRT32Q14532 448 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 WWC2Q6AWC2 1192 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 KCNV1Q6PIU1 500 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 SYNE3Q6ZMZ3 975 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 SESTD1Q86VW0 696 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 DHX38Q92620 1227 aaKnown RBP18.08■□□□□ 0.48
GABRB3-207ENST00000554722 SPATA33Q96N06 139 aa18.08■□□□□ 0.48
GABRB3-207ENST00000554722 JAKMIP1Q96N16 626 aaKnown RBP18.08■□□□□ 0.48
GABRB3-207ENST00000554722 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms