RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 NYAP2Q9P242 653 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 PI4KBQ9UBF8 816 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 NAP1L2Q9ULW6 460 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 SLC12A7Q9Y666 1083 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 ZNF536O15090 1300 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 A0A087X0B3 334 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 CCDC69A6NI79 296 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 GPR25O00155 361 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 PRPF40AO75400 957 aaKnown RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 MMP1P03956 469 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 TSPY3P0CV98 308 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 TSPY8P0CW00 308 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 NPR3P17342 541 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 WEE1P30291 646 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 CAP2P40123 477 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 NUCB2P80303 420 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 PDE4BQ07343 736 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 TRDNQ13061 729 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 GAS6Q14393 721 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 PFKFB3Q16875 520 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 FOXP4Q8IVH2 680 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 ZKSCAN4Q969J2 545 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 CLMNQ96JQ2 1002 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 UBAC1Q9BSL1 405 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 FUCA2Q9BTY2 467 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 SPZ1Q9BXG8 430 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 RNF26Q9BY78 433 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 RBCK1Q9BYM8 510 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 DEFB129Q9H1M3 183 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 TMEM260Q9NX78 707 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 CLIP2Q9UDT6 1046 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 SNCAIPQ9Y6H5 919 aa6.76□□□□□ -1.33
ATXN3-230ENST00000554673 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
ATXN3-230ENST00000554673 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 KLRF2D3W0D1 207 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 TRAF5O00463 557 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 FIBPO43427 364 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 NASPP49321 788 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-230ENST00000554673 MTMR3Q13615 1198 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 TNIP1Q15025 636 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 ABCB5Q2M3G0 1257 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 CERKLQ49MI3 558 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-230ENST00000554673 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 CERS3Q8IU89 383 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 REPS2Q8NFH8 660 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 ENGASEQ8NFI3 743 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 CRYGNQ8WXF5 182 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 COA7Q96BR5 231 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 C8orf76Q96K31 380 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
ATXN3-230ENST00000554673 TMEM60Q9H2L4 133 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 SWAP70Q9UH65 585 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 RCOR1Q9UKL0 485 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 STX8Q9UNK0 236 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 PCDHB6Q9Y5E3 794 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 DDX49Q9Y6V7 483 aaKnown RBP6.75□□□□□ -1.33
ATXN3-230ENST00000554673 PLXNA1Q9UIW2 1896 aa6.75□□□□□ -1.33
ATXN3-230ENST00000554673 ARID2Q68CP9 1835 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 FSD2A1L4K1 749 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 F5H6K3 240 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ITGB2P05107 769 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SCG2P13521 617 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 HMGN5P82970 282 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 KLRC3Q07444 240 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SSRP1Q08945 709 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SHC4Q6S5L8 630 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SLC30A10Q6XR72 485 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 TMEM179Q6ZVK1 233 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 IQCA1Q86XH1 822 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 DIS3L2Q8IYB7 885 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ANKRD13AQ8IZ07 590 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ADGRF4Q8IZF3 695 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ZNF444Q8N0Y2 327 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 SPICE1Q8N0Z3 855 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 BEND7Q8N7W2 519 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 LINC00301Q8NCQ3 95 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 TPCN2Q8NHX9 752 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ADAM32Q8TC27 787 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 COL26A1Q96A83 441 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 KLRG1Q96E93 195 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 CLIC6Q96NY7 704 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 DHX36Q9H2U1 1008 aaKnown RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 TAF1DQ9H5J8 278 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms