RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PPTC7Q8NI37 304 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 AFAP1L1Q8TED9 768 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 SYMPKQ92797 1274 aaKnown RBP12.27□□□□□ -0.45
SHMT2-215ENST00000554656 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-215ENST00000554656 SLC9A7Q96T83 725 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 FTOQ9C0B1 505 aaKnown RBP eCLIP12.27□□□□□ -0.45
SHMT2-215ENST00000554656 BCAS3Q9H6U6 928 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 CERS4Q9HA82 394 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 NOD1Q9Y239 953 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
SHMT2-215ENST00000554656 CXCL10P02778 98 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 CKBP12277 381 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ACTN1P12814 892 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 SELPP16109 830 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 UBA1P22314 1058 aaKnown RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ANP32AP39687 249 aaKnown RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 WDR5P61964 334 aaKnown RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 DEFB103AP81534 67 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 TROAPQ12815 778 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MBTPS1Q14703 1052 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MFSD10Q14728 455 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 PGM5Q15124 567 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 HSDL1Q3SXM5 330 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 LRRC8DQ7L1W4 858 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 VSIG10LQ86VR7 867 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 PIGSQ96S52 555 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 FRMPD4Q14CM0 1322 aa12.26□□□□□ -0.45
SHMT2-215ENST00000554656 LCHNA4D1U4 455 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 E7EWF7 191 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
SHMT2-215ENST00000554656 BAIAP3O94812 1187 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 GGPS1O95749 300 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 KIAA0753Q2KHM9 967 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 CELF3Q5SZQ8 465 aaKnown RBP12.25□□□□□ -0.45
SHMT2-215ENST00000554656 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
SHMT2-215ENST00000554656 MB21D2Q8IYB1 491 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-215ENST00000554656 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 PHOSPHO2Q8TCD6 241 aa12.25□□□□□ -0.45
SHMT2-215ENST00000554656 TNFRSF10AO00220 468 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 SGSM2O43147 1006 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 EPB41L2O43491 1005 aaKnown RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 POU3F3P20264 500 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 MRPS5P82675 430 aaKnown RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 TFF2Q03403 129 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 PTK7Q13308 1070 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 ZNF618Q5T7W0 954 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 ADAMTS19Q8TE59 1207 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 C16orf70Q9BSU1 422 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 TELO2Q9Y4R8 837 aa12.24□□□□□ -0.45
SHMT2-215ENST00000554656 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-215ENST00000554656 ATG2AQ2TAZ0 1938 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 GCOM1H8Y6P7 765 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-215ENST00000554656 LPXNO60711 386 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 CCND2P30279 289 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 HOXC8P31273 242 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 TRDNQ13061 729 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-215ENST00000554656 WTAPQ15007 396 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 C7orf31Q8N865 590 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-215ENST00000554656 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 KATNAL1Q9BW62 490 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 OSBPL7Q9BZF2 842 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 NLRC5Q86WI3 1866 aa12.23□□□□□ -0.45
SHMT2-215ENST00000554656 TLL1O43897 1013 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 SEC24BO95487 1268 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 KCNQ1P51787 676 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 GRB10Q13322 594 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 NCOA7Q8NI08 942 aa12.22□□□□□ -0.45
SHMT2-215ENST00000554656 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms