RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 ZNF286BP0CG31 522 aa28.17■■■□□ 2.1
FOXA1-204ENST00000554607 TRIM71Q2Q1W2 868 aaKnown RBP28.17■■■□□ 2.1
FOXA1-204ENST00000554607 SMC5Q8IY18 1101 aa28.17■■■□□ 2.1
FOXA1-204ENST00000554607 GDPD5Q8WTR4 605 aa28.17■■■□□ 2.1
FOXA1-204ENST00000554607 HOXD8P13378 290 aaPredicted RBP28.16■■■□□ 2.1
FOXA1-204ENST00000554607 IFIT1BQ5T764 474 aaKnown RBP28.16■■■□□ 2.1
FOXA1-204ENST00000554607 ZNF618Q5T7W0 954 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 MYSM1Q5VVJ2 828 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 B4GALNT3Q6L9W6 998 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 STOX1Q6ZVD7 989 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 PLEKHM2Q8IWE5 1019 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 PDCD2LQ9BRP1 358 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 SUGCTQ9HAC7 445 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 EMSYQ7Z589 1322 aa28.16■■■□□ 2.1
FOXA1-204ENST00000554607 LGR5O75473 907 aa28.15■■■□□ 2.1
FOXA1-204ENST00000554607 MYCLP12524 364 aaPredicted RBP28.15■■■□□ 2.1
FOXA1-204ENST00000554607 TRAF1Q13077 416 aa28.15■■■□□ 2.1
FOXA1-204ENST00000554607 CELF3Q5SZQ8 465 aaKnown RBP28.15■■■□□ 2.1
FOXA1-204ENST00000554607 CHD1LQ86WJ1 897 aa28.15■■■□□ 2.1
FOXA1-204ENST00000554607 SPATA33Q96N06 139 aa28.15■■■□□ 2.1
FOXA1-204ENST00000554607 MYH7BA7E2Y1 1941 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 LINC01553A4QN01 128 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 KLRF2D3W0D1 207 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 OPLAHO14841 1288 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 TGFB3P10600 412 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 TCTN1Q2MV58 587 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 TRAF7Q6Q0C0 670 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 VSIG10LQ86VR7 867 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 EPHX3Q9H6B9 360 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 MTUS1Q9ULD2 1270 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 INSL6Q9Y581 213 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 PCDHA1Q9Y5I3 950 aa28.14■■■□□ 2.1
FOXA1-204ENST00000554607 ZBTB5O15062 677 aa28.13■■■□□ 2.09
FOXA1-204ENST00000554607 STAG2Q8N3U4 1231 aa28.13■■■□□ 2.09
FOXA1-204ENST00000554607 MTMR8Q96EF0 704 aa28.13■■■□□ 2.09
FOXA1-204ENST00000554607 COL4A4P53420 1690 aaPredicted RBP28.13■■■□□ 2.09
FOXA1-204ENST00000554607 RGS20O76081 388 aa28.12■■■□□ 2.09
FOXA1-204ENST00000554607 GGPS1O95749 300 aa28.12■■■□□ 2.09
FOXA1-204ENST00000554607 AMHP03971 560 aa28.12■■■□□ 2.09
FOXA1-204ENST00000554607 ZNF200P98182 395 aaPredicted RBP28.12■■■□□ 2.09
FOXA1-204ENST00000554607 HSDL1Q3SXM5 330 aa28.12■■■□□ 2.09
FOXA1-204ENST00000554607 WNT8BQ93098 351 aa28.12■■■□□ 2.09
FOXA1-204ENST00000554607 ARIH1Q9Y4X5 557 aaPredicted RBP28.12■■■□□ 2.09
FOXA1-204ENST00000554607 RSPH10B2B2RC85 870 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 RSPH10BP0C881 870 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 NUCB1Q02818 461 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 MBTPS1Q14703 1052 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 PGM5Q15124 567 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 TMEM31Q5JXX7 168 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 FAM117BQ6P1L5 589 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 SERINC5Q86VE9 423 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 LRFN3Q9BTN0 628 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 MLXIPQ9HAP2 919 aa28.11■■■□□ 2.09
FOXA1-204ENST00000554607 CCND2P30279 289 aa28.1■■■□□ 2.09
FOXA1-204ENST00000554607 THPOP40225 353 aa28.1■■■□□ 2.09
FOXA1-204ENST00000554607 MAD2L2Q9UI95 211 aa28.1■■■□□ 2.09
FOXA1-204ENST00000554607 HCN4Q9Y3Q4 1203 aa28.1■■■□□ 2.09
FOXA1-204ENST00000554607 PALM3A6NDB9 673 aaPredicted RBP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 GCOM1H8Y6P7 765 aaPredicted RBP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 PPP1R11O60927 126 aaPredicted RBP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 POLR2MP0CAP2 368 aa28.09■■■□□ 2.09
FOXA1-204ENST00000554607 HOXA13P31271 388 aaPredicted RBP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 SEC23AQ15436 765 aa28.09■■■□□ 2.09
FOXA1-204ENST00000554607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 DBF4BQ8NFT6 615 aa28.09■■■□□ 2.09
FOXA1-204ENST00000554607 C16orf70Q9BSU1 422 aa28.09■■■□□ 2.09
FOXA1-204ENST00000554607 UBE2ZQ9H832 354 aaPredicted RBP28.09■■■□□ 2.09
FOXA1-204ENST00000554607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.08■■■□□ 2.09
FOXA1-204ENST00000554607 C17orf102A2RUQ5 167 aa28.08■■■□□ 2.09
FOXA1-204ENST00000554607 SORBS3O60504 671 aa28.08■■■□□ 2.09
FOXA1-204ENST00000554607 UBA1P22314 1058 aaKnown RBP28.08■■■□□ 2.09
FOXA1-204ENST00000554607 MYOCDQ8IZQ8 938 aa28.08■■■□□ 2.09
FOXA1-204ENST00000554607 FBXO22Q8NEZ5 403 aa28.08■■■□□ 2.09
FOXA1-204ENST00000554607 ATP6V0A1Q93050 837 aa28.08■■■□□ 2.09
FOXA1-204ENST00000554607 SIP14410 1827 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 H3BRB1 525 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 HTRA4P83105 476 aaPredicted RBP28.07■■■□□ 2.08
FOXA1-204ENST00000554607 SP2Q02086 613 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 HIC1Q14526 733 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 PLEKHG4Q58EX7 1191 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 SAMD11Q96NU1 681 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 TUT1Q9H6E5 874 aaKnown RBP28.07■■■□□ 2.08
FOXA1-204ENST00000554607 BRWD1Q9NSI6 2320 aa28.07■■■□□ 2.08
FOXA1-204ENST00000554607 GPR37L1O60883 481 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 CAND2O75155 1236 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 TRDNQ13061 729 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 LEXMQ3ZCV2 418 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 HOMER1Q86YM7 354 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 IL31RAQ8NI17 732 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 SEPT8Q92599 483 aa28.06■■■□□ 2.08
FOXA1-204ENST00000554607 MKRN4PQ13434 485 aaPredicted RBP28.05■■■□□ 2.08
FOXA1-204ENST00000554607 PTPROQ16827 1216 aa28.05■■■□□ 2.08
FOXA1-204ENST00000554607 GNPTABQ3T906 1256 aa28.05■■■□□ 2.08
FOXA1-204ENST00000554607 FCHSD1Q86WN1 690 aa28.05■■■□□ 2.08
FOXA1-204ENST00000554607 SP7Q8TDD2 431 aaPredicted RBP28.05■■■□□ 2.08
FOXA1-204ENST00000554607 C17orf80Q9BSJ5 609 aa28.05■■■□□ 2.08
FOXA1-204ENST00000554607 RIOX1Q9H6W3 641 aa28.05■■■□□ 2.08
FOXA1-204ENST00000554607 NOP56O00567 594 aaKnown RBP28.04■■■□□ 2.08
FOXA1-204ENST00000554607 STAM2O75886 525 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 SMIM10L2AP0DMW4 78 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms