RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 hCG_1984214I3L0E3 225 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZBTB22O15209 634 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 NOVP48745 357 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 FAM193AP78312 1265 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZNF713Q8N859 430 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 EHD2Q9NZN4 543 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 NCK2O43639 380 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 BUB1O43683 1085 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 ADRA2BP18089 450 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 TUBB4BP68371 445 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 PDIA5Q14554 519 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZBTB5O15062 677 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 FGFR1OPO95684 399 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZFP91Q96JP5 570 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 DBNDD1Q9H9R9 158 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 POLD4Q9HCU8 107 aa17.38■□□□□ 0.37
ARHGEF40-203ENST00000554514 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 RASSF7Q02833 373 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 CKAP4Q07065 602 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 ORC2Q13416 577 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 TMEM119Q4V9L6 283 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 FAM26FQ5R3K3 315 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 COG1Q8WTW3 980 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 TACC1O75410 805 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 LRRC63Q05C16 580 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 IKQ13123 557 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 HERC4Q5GLZ8 1057 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 TXLNBQ8N3L3 684 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 COA1Q9GZY4 146 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 PCDHA1Q9Y5I3 950 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 MYBL2P10244 700 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 MAGEA1P43355 309 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 QRICH1Q2TAL8 776 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 FIGNQ5HY92 759 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 GPBP1Q86WP2 473 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 DNAJC19Q96DA6 116 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 BMP2KQ9NSY1 1161 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-203ENST00000554514 MEIS1O00470 390 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 TRIM37O94972 964 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 SLC1A4P43007 532 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 USH1GQ495M9 461 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 WDR93Q6P2C0 686 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 CALCOCO1Q9P1Z2 691 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 RIN2Q8WYP3 895 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 LSM14BQ9BX40 385 aaKnown RBP17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 PLEKHA4Q9H4M7 779 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 SALL4Q9UJQ4 1053 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 COL4A3BPQ9Y5P4 624 aa17.36■□□□□ 0.37
ARHGEF40-203ENST00000554514 MYH10P35580 1976 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 PLA2G4BP0C869 781 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTEIP0CG38 1075 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 POLR2FP61218 127 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 KCNMA1Q12791 1236 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 COBLL1Q53SF7 1204 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTEGQ6S5H5 508 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTEEQ6S8J3 1075 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 TRIM58Q8NG06 486 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 TEKT1Q969V4 418 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 LY75O60449 1722 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 EEF2P13639 858 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 SLC7A5Q01650 507 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 BAP1Q92560 729 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 LRRC27Q9C0I9 530 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
ARHGEF40-203ENST00000554514 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms