RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
IFT43-206ENST00000554026 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
IFT43-206ENST00000554026 KCNJ14Q9UNX9 436 aa12.84□□□□□ -0.35
IFT43-206ENST00000554026 UBIAD1Q9Y5Z9 338 aa12.84□□□□□ -0.35
IFT43-206ENST00000554026 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
IFT43-206ENST00000554026 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.35
IFT43-206ENST00000554026 DYNC1LI2O43237 492 aaPredicted RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 ADAMTS4O75173 837 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 CABYRO75952 493 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 GJB2P29033 226 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 CIITAP33076 1130 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 LRRC41Q15345 812 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 NPY5RQ15761 445 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 GNASQ5JWF2 1037 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 ANO1Q5XXA6 986 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 OR6J1Q8NGC5 347 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 CRYGNQ8WXF5 182 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 SEZ6LQ9BYH1 1024 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 FOXP1Q9H334 677 aaPredicted RBP12.83□□□□□ -0.36
IFT43-206ENST00000554026 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
IFT43-206ENST00000554026 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.82□□□□□ -0.36
IFT43-206ENST00000554026 H3BQV1 296 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 MEIS1O00470 390 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 RGS20O76081 388 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 PGK1P00558 417 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
IFT43-206ENST00000554026 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
IFT43-206ENST00000554026 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 TBCKQ8TEA7 893 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 MLXIPQ9HAP2 919 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 TCEAL9Q9UHQ7 104 aa12.82□□□□□ -0.36
IFT43-206ENST00000554026 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
IFT43-206ENST00000554026 CYP3A7-CYP3A51PA0A087WV96 503 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 A6NJR5 290 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
IFT43-206ENST00000554026 ITGB5P18084 799 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 CYP3A7P24462 503 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 BECN1Q14457 450 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 LY6KQ17RY6 165 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 CELF3Q5SZQ8 465 aaKnown RBP12.81□□□□□ -0.36
IFT43-206ENST00000554026 GJC2Q5T442 439 aaPredicted RBP12.81□□□□□ -0.36
IFT43-206ENST00000554026 METTL7BQ6UX53 244 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 NEK8Q86SG6 692 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 PPTC7Q8NI37 304 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 GLT1D1Q96MS3 346 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
IFT43-206ENST00000554026 NOP56O00567 594 aaKnown RBP12.8□□□□□ -0.36
IFT43-206ENST00000554026 ADCY6O43306 1168 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 ARIH2O95376 493 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 GGPS1O95749 300 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 UBA1P22314 1058 aaKnown RBP12.8□□□□□ -0.36
IFT43-206ENST00000554026 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
IFT43-206ENST00000554026 ACLYP53396 1101 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 ARHGAP1Q07960 439 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 ORC2Q13416 577 aaPredicted RBP12.8□□□□□ -0.36
IFT43-206ENST00000554026 KCNA10Q16322 511 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 DGKDQ16760 1214 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 MYSM1Q5VVJ2 828 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 LARP1BQ659C4 914 aaKnown RBP12.8□□□□□ -0.36
IFT43-206ENST00000554026 PPP4R3AQ6IN85 833 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 PIK3AP1Q6ZUJ8 805 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 UBE2Q1Q7Z7E8 422 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 PAWRQ96IZ0 340 aaKnown RBP12.8□□□□□ -0.36
IFT43-206ENST00000554026 GJB4Q9NTQ9 266 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 NFASCO94856 1347 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 ELP1O95163 1332 aa12.8□□□□□ -0.36
IFT43-206ENST00000554026 RANBP2P49792 3224 aaKnown RBP12.79□□□□□ -0.36
IFT43-206ENST00000554026 IGLV3-22A0A075B6J6 115 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 BTBD18B2RXH4 712 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 COL6A1P12109 1028 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
IFT43-206ENST00000554026 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 INF2Q27J81 1249 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 Q4G0T1 1027 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 PRR16Q569H4 304 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
IFT43-206ENST00000554026 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
IFT43-206ENST00000554026 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
IFT43-206ENST00000554026 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms