RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 MYBL2P10244 700 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CACNB3P54284 484 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 APBA1Q02410 837 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 GFPT1Q06210 699 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 COG1Q8WTW3 980 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 DNAJC19Q96DA6 116 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CRACR2AQ9BSW2 395 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 ANO9A1A5B4 782 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 ZBTB5O15062 677 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 TUBBP07437 444 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 HNRNPH3P31942 346 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 EHHADHQ08426 723 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 PPP4R3AQ6IN85 833 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 EXOC4Q96A65 974 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 TSG101Q99816 390 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 TSGA10Q9BZW7 698 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 PANK4Q9NVE7 773 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 MYH7BA7E2Y1 1941 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.178e-6■□□□□ 8.9
ACTN1-211ENST00000553882 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 TDRD12Q587J7 1177 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 ZFPM1Q8IX07 1006 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 TRIM58Q8NG06 486 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 BAP1Q92560 729 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
ACTN1-211ENST00000553882 ZHX3Q9H4I2 956 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 SALL4Q9UJQ4 1053 aa16.14■□□□□ 0.17
ACTN1-211ENST00000553882 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 POTECB2RU33 542 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 TACC1O75410 805 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-211ENST00000553882 TCP10Q12799 353 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 CDC42EP5Q6NZY7 148 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 NFRKBQ6P4R8 1299 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 SNX12Q9UMY4 172 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
ACTN1-211ENST00000553882 STAT3P40763 770 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 KCNMA1Q12791 1236 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
ACTN1-211ENST00000553882 ZSCAN26Q16670 478 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-211ENST00000553882 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 PCDHAC2Q9Y5I4 1007 aa16.13■□□□□ 0.17
ACTN1-211ENST00000553882 NCK2O43639 380 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 BUB1O43683 1085 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 MAGEA1P43355 309 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 FKBP3Q00688 224 aaKnown RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 RASSF7Q02833 373 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 ENOX2Q16206 610 aaKnown RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 CREG2Q8IUH2 290 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 RIN2Q8WYP3 895 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 COA1Q9GZY4 146 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 COL4A3BPQ9Y5P4 624 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 CAPN2P17655 700 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 SLC1A4P43007 532 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 SNAP25P60880 206 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 ARID5AQ03989 594 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 GPATCH4Q5T3I0 446 aaKnown RBP16.12■□□□□ 0.17
ACTN1-211ENST00000553882 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
ACTN1-211ENST00000553882 FOCADQ5VW36 1801 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 DNA2P51530 1060 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 PSMD2Q13200 908 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-211ENST00000553882 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-211ENST00000553882 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 PCDHA1Q9Y5I3 950 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 G3V3G9 751 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 QRICH1Q2TAL8 776 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 PDXDC1Q6P996 788 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 GPBP1Q86WP2 473 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 IQCDQ96DY2 449 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 LRRC27Q9C0I9 530 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 DNAJC18Q9H819 358 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
ACTN1-211ENST00000553882 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
ACTN1-211ENST00000553882 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms