RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 GNPTABQ3T906 1256 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 STAG2Q8N3U4 1231 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 GDPD5Q8WTR4 605 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 PIBF1Q8WXW3 757 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
ACTN1-210ENST00000553779 MTCH2Q9Y6C9 303 aa11.48□□□□□ -0.57
ACTN1-210ENST00000553779 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-210ENST00000553779 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 THPOP40225 353 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 HSD17B4P51659 736 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 KCNQ1P51787 676 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 PTK7Q13308 1070 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 KAT2BQ92831 832 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 CUL5Q93034 780 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 HLA-CQ95604 372 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-210ENST00000553779 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-210ENST00000553779 PDCD2LQ9BRP1 358 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 COG5Q9UP83 839 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
ACTN1-210ENST00000553779 MYH9P35579 1960 aaKnown RBP11.47□□□□□ -0.57
ACTN1-210ENST00000553779 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 C17orf102A2RUQ5 167 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 EPOPA6NHQ4 379 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 F2P00734 622 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 IGHDP01880 384 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 AMHP03971 560 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 DEFB103AP81534 67 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 GRB10Q13322 594 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 PGM5Q15124 567 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 CELF3Q5SZQ8 465 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 KRT40Q6A162 431 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 TMCO2Q7Z6W1 182 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 ATP6V0A1Q93050 837 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 VWCEQ96DN2 955 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 TGS1Q96RS0 853 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 PIGSQ96S52 555 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 MAP3K20Q9NYL2 800 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 SEC63Q9UGP8 760 aaKnown RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 MAD2L2Q9UI95 211 aa11.46□□□□□ -0.57
ACTN1-210ENST00000553779 ZNF215Q9UL58 517 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-210ENST00000553779 LCHNA4D1U4 455 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 LGR5O75473 907 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 SP4Q02446 784 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 GRM4Q14833 912 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 ZNF618Q5T7W0 954 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 SAMD3Q8N6K7 520 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-210ENST00000553779 SMARCC2Q8TAQ2 1214 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-210ENST00000553779 RAD9AQ99638 391 aa11.45□□□□□ -0.58
ACTN1-210ENST00000553779 EVPLQ92817 2033 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 RSPH10B2B2RC85 870 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 NBNO60934 754 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 GJB5O95377 273 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 CXCL10P02778 98 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 CTSHP09668 335 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 RSPH10BP0C881 870 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 GNAT1P11488 350 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 KIF5BP33176 963 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-210ENST00000553779 RBL2Q08999 1139 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 SEC23AQ15436 765 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 HSDL1Q3SXM5 330 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 NFXL1Q6ZNB6 911 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 IL31RAQ8NI17 732 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 SEPT8Q92599 483 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 RRP36Q96EU6 259 aaKnown RBP11.44□□□□□ -0.58
ACTN1-210ENST00000553779 C1QTNF1Q9BXJ1 281 aa11.44□□□□□ -0.58
ACTN1-210ENST00000553779 ATG2AQ2TAZ0 1938 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-210ENST00000553779 H3BRB1 525 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 OPLAHO14841 1288 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 PPP1R11O60927 126 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-210ENST00000553779 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 LGALS2P05162 132 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 TGFB3P10600 412 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 NEDD9Q14511 834 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
ACTN1-210ENST00000553779 EP400NLQ6ZTU2 488 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 VSIG10LQ86VR7 867 aa11.43□□□□□ -0.58
ACTN1-210ENST00000553779 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms