RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 PTPN21Q16825 1174 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 WHAMMP3Q1A5X7 153 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 ZCWPW2Q504Y3 356 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 FAM26FQ5R3K3 315 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 SRGAP1Q7Z6B7 1085 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 OGFOD1Q8N543 542 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 SYT2Q8N9I0 419 aaPredicted RBP11.95□□□□□ -0.5
TTC8-208ENST00000553718 ETNPPLQ8TBG4 499 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 SYN2Q92777 582 aaPredicted RBP11.95□□□□□ -0.5
TTC8-208ENST00000553718 WDR24Q96S15 920 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 TSGA10Q9BZW7 698 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
TTC8-208ENST00000553718 SLC39A2Q9NP94 309 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 PANK4Q9NVE7 773 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 PLAGL2Q9UPG8 496 aa11.95□□□□□ -0.5
TTC8-208ENST00000553718 YDJCA8MPS7 323 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 B4DLN1 442 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L15C9J2P7 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L13C9JLJ4 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L11C9JVI0 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L18D6R9N7 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L22D6RA61 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L17D6RBQ6 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L19D6RCP7 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L20D6RJB6 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 PSMD14O00487 310 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 KRT86O43790 486 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 LCA5LO95447 670 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 TRIM21P19474 475 aaKnown RBP11.94□□□□□ -0.5
TTC8-208ENST00000553718 ARHGAP25P42331 645 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 SPIRE1Q08AE8 756 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L24Q0WX57 530 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 COASYQ13057 564 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 DLGAP5Q15398 846 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 ELF2Q15723 593 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 USP17L6PQ6QN14 398 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 NAPGQ99747 312 aaPredicted RBP11.94□□□□□ -0.5
TTC8-208ENST00000553718 DESI2Q9BSY9 194 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
TTC8-208ENST00000553718 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
TTC8-208ENST00000553718 PRR12Q9ULL5 1215 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 DNM3Q9UQ16 869 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
TTC8-208ENST00000553718 PCDHA2Q9Y5H9 948 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
TTC8-208ENST00000553718 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 SSU72P8A0A1W2PR75 194 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 RASSF10A6NK89 507 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
TTC8-208ENST00000553718 FANCGO15287 622 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 GH2P01242 217 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 IDEP14735 1019 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 CYP11B2P19099 503 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 CHRNA5P30532 468 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 STAT2P52630 851 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 GHRHRQ02643 423 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 ECM1Q16610 540 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 NFIL3Q16649 462 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 ZNF569Q5MCW4 686 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 LRRC55Q6ZSA7 311 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 DYMQ7RTS9 669 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 KCNK18Q7Z418 384 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
TTC8-208ENST00000553718 ZBED3Q96IU2 234 aaPredicted RBP11.93□□□□□ -0.5
TTC8-208ENST00000553718 CHP1Q99653 195 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
TTC8-208ENST00000553718 TUFT1Q9NNX1 390 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 FEM1BQ9UK73 627 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 TRAF3IP3Q9Y228 551 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 SIK3Q9Y2K2 1263 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
TTC8-208ENST00000553718 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
TTC8-208ENST00000553718 GAP43P17677 238 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 CACNB3P54284 484 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
TTC8-208ENST00000553718 NAA30Q147X3 362 aaPredicted RBP11.92□□□□□ -0.5
TTC8-208ENST00000553718 BRD3Q15059 726 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 BMT2Q1RMZ1 405 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 FBXO38Q6PIJ6 1188 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 TMCO3Q6UWJ1 677 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 HNRNPLLQ8WVV9 542 aaKnown RBP11.92□□□□□ -0.5
TTC8-208ENST00000553718 LENG9Q96B70 501 aa11.92□□□□□ -0.5
TTC8-208ENST00000553718 PURBQ96QR8 312 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms