RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 MAFGO15525 162 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 ZEB2O60315 1214 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 RGS20O76081 388 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 ARIH2O95376 493 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 ITGB5P18084 799 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 CPT1AP50416 773 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 USP11P51784 963 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 GJA9P57773 515 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 NR5A1Q13285 461 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 NEDD9Q14511 834 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 LARP1BQ659C4 914 aaKnown RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 CCDC62Q6P9F0 684 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 NIPA1Q7RTP0 329 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
TUBB3-202ENST00000553656 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 KIAA0100Q14667 2235 aaKnown RBP15.74■□□□□ 0.11
TUBB3-202ENST00000553656 ADAMTS4O75173 837 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 GGPS1O95749 300 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 UBA1P22314 1058 aaKnown RBP15.74■□□□□ 0.11
TUBB3-202ENST00000553656 LAMC2Q13753 1193 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 LRRC41Q15345 812 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
TUBB3-202ENST00000553656 INF2Q27J81 1249 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 NEK8Q86SG6 692 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 PLA2G4DQ86XP0 818 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 PCSK9Q8NBP7 692 aaKnown RBP15.74■□□□□ 0.11
TUBB3-202ENST00000553656 COPS5Q92905 334 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 FOXP1Q9H334 677 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-202ENST00000553656 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
TUBB3-202ENST00000553656 MEIS1O00470 390 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 CST5P28325 142 aaPredicted RBP15.73■□□□□ 0.11
TUBB3-202ENST00000553656 CIITAP33076 1130 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 LETM2Q2VYF4 491 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 PRR16Q569H4 304 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 CELF3Q5SZQ8 465 aaKnown RBP15.73■□□□□ 0.11
TUBB3-202ENST00000553656 TMEM63BQ5T3F8 832 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 NECAB2Q7Z6G3 386 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 CRYGNQ8WXF5 182 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 SENP7Q9BQF6 1050 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 SDF4Q9BRK5 362 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 KCNH7Q9NS40 1196 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 TCEAL9Q9UHQ7 104 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 CENPFP49454 3210 aa15.73■□□□□ 0.11
TUBB3-202ENST00000553656 MOXD2PA6NHM9 499 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 FAM86B1E9PN63 330 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 NOP56O00567 594 aaKnown RBP15.72■□□□□ 0.11
TUBB3-202ENST00000553656 SORBS3O60504 671 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 FAM86B2P0C5J1 330 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 GCFC2P16383 781 aaKnown RBP15.72■□□□□ 0.11
TUBB3-202ENST00000553656 PTGS1P23219 599 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 ARHGAP1Q07960 439 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 SEMA3FQ13275 785 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 MOXD1Q6UVY6 613 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 KLHDC9Q8NEP7 349 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 TNFRSF25Q93038 417 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 EMID1Q96A84 441 aaPredicted RBP15.72■□□□□ 0.11
TUBB3-202ENST00000553656 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 TSEN34Q9BSV6 310 aaKnown RBP15.72■□□□□ 0.11
TUBB3-202ENST00000553656 C11orf49Q9H6J7 331 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 NOL7Q9UMY1 257 aaKnown RBP15.72■□□□□ 0.11
TUBB3-202ENST00000553656 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
TUBB3-202ENST00000553656 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
TUBB3-202ENST00000553656 MYADML2A6NDP7 307 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 CCNT1O60563 726 aaKnown RBP15.71■□□□□ 0.11
TUBB3-202ENST00000553656 KPNA6O60684 536 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 ARP10275 920 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 KCNA2P16389 499 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 NKX3-2P78367 333 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 BEX3Q00994 111 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 SP2Q02086 613 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 KCNA10Q16322 511 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 NOSTRINQ8IVI9 506 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 PPTC7Q8NI37 304 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 AFG1LQ8WV93 481 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 PAWRQ96IZ0 340 aaKnown RBP15.71■□□□□ 0.11
TUBB3-202ENST00000553656 ZNF577Q9BSK1 485 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 AGO4Q9HCK5 861 aaKnown RBP15.71■□□□□ 0.11
TUBB3-202ENST00000553656 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
TUBB3-202ENST00000553656 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
TUBB3-202ENST00000553656 IGLV3-22A0A075B6J6 115 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 FAM205CA6NFA0 338 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 MARCH6O60337 910 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 TDP2O95551 362 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 MYL3P08590 195 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 ACLYP53396 1101 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 SP4Q02446 784 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 DGKDQ16760 1214 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 EARS2Q5JPH6 523 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms