RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KCNH7Q9NS40 1196 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 FIBPO43427 364 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 SLC37A4O43826 429 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 ARHGAP1Q07960 439 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 Q4G0T1 1027 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 COPS5Q92905 334 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 CRISPLD2Q9H0B8 497 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 UPF3AQ9H1J1 476 aaKnown RBP16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
MTHFD1-204ENST00000553405 MKI67P46013 3256 aaKnown RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 DOCK5Q9H7D0 1870 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 DHX15O43143 795 aaKnown RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 ADAMTS4O75173 837 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 DUSP11O75319 330 aaKnown RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 GJB1P08034 283 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 TGFB3P10600 412 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 ANP32AP39687 249 aaKnown RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 TNFAIP2Q03169 654 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 GNPTABQ3T906 1256 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 EMID1Q96A84 441 aaPredicted RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 SENP7Q9BQF6 1050 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 AGO4Q9HCK5 861 aaKnown RBP16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
MTHFD1-204ENST00000553405 MSH4O15457 936 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 MAFGO15525 162 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 BRD1O95696 1058 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 MYCP01106 439 aaPredicted RBP16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 MTMR1Q13613 665 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 LETM2Q2VYF4 491 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 PRR16Q569H4 304 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 ABHD8Q96I13 439 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 RNF208Q9H0X6 261 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 OGDHLQ9ULD0 1010 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 Q9Y3F1 56 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
MTHFD1-204ENST00000553405 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 HOXD8P13378 290 aaPredicted RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 CNGA1P29973 690 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 GJA9P57773 515 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 SETQ01105 290 aaPredicted RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 NBR1Q14596 966 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 B3GNT9Q6UX72 402 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 PLA2G4DQ86XP0 818 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 KLHDC9Q8NEP7 349 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 HAS1Q92839 578 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 SLC5A5Q92911 643 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 DEFB118Q96PH6 123 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
MTHFD1-204ENST00000553405 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 MSCO60682 206 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 SGPL1O95470 568 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 PDIA4P13667 645 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 GJA8P48165 433 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 FAM173BQ6P4H8 233 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 TLK2Q86UE8 772 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 U2AF1L4Q8WU68 220 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 GJA10Q969M2 543 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 CDHR1Q96JP9 859 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 MTMR9Q96QG7 549 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 NFASCO94856 1347 aa16.85■□□□□ 0.29
MTHFD1-204ENST00000553405 A6NJR5 290 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 GGPS1O95749 300 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 PGK1P00558 417 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 RARBP10826 455 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms