RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 ZNF286BP0CG31 522 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 PDIA3P30101 505 aaKnown RBP11.72□□□□□ -0.53
LINC00517-201ENST00000553396 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
LINC00517-201ENST00000553396 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 PHKBQ93100 1093 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 TRPV6Q9H1D0 765 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 SZT2Q5T011 3432 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 SMCO2A6NFE2 343 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 KPNA6O60684 536 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 CD4P01730 458 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 SCG2P13521 617 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 ADCY7P51828 1080 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 SP2Q02086 613 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 STK3Q13188 491 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 CELF3Q5SZQ8 465 aaKnown RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 MYSM1Q5VVJ2 828 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
LINC00517-201ENST00000553396 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PCDHA6Q9UN73 950 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 PCDHA8Q9Y5H6 950 aa11.71□□□□□ -0.53
LINC00517-201ENST00000553396 TRIP12Q14669 1992 aaPredicted RBP11.7□□□□□ -0.54
LINC00517-201ENST00000553396 UMODL1Q5DID0 1318 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 FIBPO43427 364 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 STAM2O75886 525 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SEC24BO95487 1268 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 TIMP1P01033 207 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 CYP2C18P33260 490 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 EPHB4P54760 987 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 EVCP57679 992 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SP4Q02446 784 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 FPGSQ05932 587 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SEMA3FQ13275 785 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SHHQ15465 462 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 NTRK3Q16288 839 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 DGKDQ16760 1214 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 HSDL1Q3SXM5 330 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 PPTC7Q8NI37 304 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 KAT2BQ92831 832 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SLC26A6Q9BXS9 759 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 TMEM260Q9NX78 707 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
LINC00517-201ENST00000553396 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
LINC00517-201ENST00000553396 SLC34A2O95436 690 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 TGFB3P10600 412 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 CYP2C9P11712 490 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 ICAM3P32942 547 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 PKN1Q16512 942 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 SEZ6LQ9BYH1 1024 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
LINC00517-201ENST00000553396 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 CPLX1O14810 134 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 ADAMTS3O15072 1205 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 CSF2RAP15509 400 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 IFNAR1P17181 557 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 ITGB5P18084 799 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 PSEN2P49810 448 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 CCL23P55773 120 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 ANAPC15P60006 121 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 NEDD9Q14511 834 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 MFSD10Q14728 455 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 XRRA1Q6P2D8 792 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 ZNF274Q96GC6 653 aaPredicted RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 RNF26Q9BY78 433 aaPredicted RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms