RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 WDR43Q15061 677 aaKnown RBP eCLIP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 AMHR2Q16671 573 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 SH3D19Q5HYK7 790 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 RRP12Q5JTH9 1297 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 SLC10A5Q5PT55 438 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 KAZNQ674X7 775 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 NXNQ6DKJ4 435 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 NAA16Q6N069 864 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 INTS5Q6P9B9 1019 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 FBXO33Q7Z6M2 555 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 RAVER1Q8IY67 606 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 RNF168Q8IYW5 571 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 C7orf61Q8IZ16 206 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 OR8H2Q8N162 312 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CCAR2Q8N163 923 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 LRRC43Q8N309 656 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 TNIP2Q8NFZ5 429 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 TRIM58Q8NG06 486 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PIBF1Q8WXW3 757 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 APPBP2Q92624 585 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 DCPSQ96C86 337 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CLMNQ96JQ2 1002 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 C1orf74Q96LT6 269 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 TBATAQ96M53 351 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CNTNAP3BQ96NU0 1288 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PPP1R9BQ96SB3 815 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 RUFY1Q96T51 708 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 GMLQ99445 158 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CNTNAP3Q9BZ76 1288 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 SLKQ9H2G2 1235 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 MMADHCQ9H3L0 296 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 SYNCQ9H7C4 482 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 TMEM165Q9HC07 324 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PTPRHQ9HD43 1115 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 NGRNQ9NPE2 291 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PIH1D1Q9NWS0 290 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 ANKIB1Q9P2G1 1089 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 HDAC6Q9UBN7 1215 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PARP2Q9UGN5 583 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CNOT7Q9UIV1 285 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 C2CD2Q9Y426 696 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 WDFY4Q6ZS81 3184 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 FAM205AQ6ZU69 1335 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 LTN1O94822 1766 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ALPK3Q96L96 1907 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 IBTKQ9P2D0 1353 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ST20-MTHFSA0A0A6YYL1 179 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 SOWAHDA6NJG2 315 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 POLR3GO15318 223 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TTI1O43156 1089 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TSPAN6O43657 245 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CPP00450 1065 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 KRT13P13646 458 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 RPS2P15880 293 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ZFXP17010 805 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 SYN1P17600 705 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 EIF4BP23588 611 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CYP2C19P33261 490 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 HNRNPH2P55795 449 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 HSD17B7P56937 341 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 LSM11P83369 360 aaKnown RBP eCLIP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ITIH3Q06033 890 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 MORC3Q14149 939 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 SART3Q15020 963 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 C8orf34Q49A92 452 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TNNI3KQ59H18 835 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 RILPL1Q5EBL4 403 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 EMC10Q5UCC4 262 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ABRAXAS1Q6UWZ7 409 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ATF7IPQ6VMQ6 1270 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 GIGYF2Q6Y7W6 1299 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CCDC129Q6ZRS4 1044 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 BTN2A1Q7KYR7 527 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 KIAA1328Q86T90 577 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 RPAP2Q8IXW5 612 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TTC39CQ8N584 583 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 SMYD1Q8NB12 490 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 LILRB1Q8NHL6 650 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 U2AF1L4Q8WU68 220 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 IPCEF1Q8WWN9 437 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 KHSRPQ92945 711 aaKnown RBP eCLIP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ATP6V1E2Q96A05 226 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 EXOC4Q96A65 974 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 DTNBP1Q96EV8 351 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CDCA5Q96FF9 252 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CRBNQ96SW2 442 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 HAUS7Q99871 368 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 MRPL9Q9BYD2 267 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CSRNP2Q9H175 543 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 MRPL46Q9H2W6 279 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CCSER2Q9H7U1 834 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 FANCFQ9NPI8 374 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 LUZP4Q9P127 313 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 STK39Q9UEW8 545 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 CROTQ9UKG9 612 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 PRELID1Q9Y255 219 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms