RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LGR5O75473 907 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 EEF2P13639 858 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 ZNF16P17020 682 aaPredicted RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 MRPL12P52815 198 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 CHMP4BP1P59074 171 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 CNTN2Q02246 1040 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 EVX2Q03828 476 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 DMWDQ09019 674 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 TKFCQ3LXA3 575 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 NAALADL2Q58DX5 795 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 PPP4R3BQ5MIZ7 849 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 FAM83BQ5T0W9 1011 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 DESI1Q6ICB0 168 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 ZC3H14Q6PJT7 736 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 PI16Q6UXB8 463 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 AMOTL1Q8IY63 956 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 EFHBQ8N7U6 833 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 FAM133AQ8N9E0 248 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 SMRP1Q8NCR6 262 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 STK32AQ8WU08 396 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 MRRFQ96E11 262 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 MSLNLQ96KJ4 702 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 MPHOSPH6Q99547 160 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 RTP3Q9BQQ7 232 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 CRNKL1Q9BZJ0 848 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 ACAD9Q9H845 621 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 RAVER2Q9HCJ3 691 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 INCENPQ9NQS7 918 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 PDGFCQ9NRA1 345 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 ADD3Q9UEY8 706 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 NOVA2Q9UNW9 492 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 PA2G4Q9UQ80 394 aaKnown RBP6.19□□□□□ -1.42
CKAP4-203ENST00000553039 NR2E1Q9Y466 385 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 TRANK1O15050 2925 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 FANCIQ9NVI1 1328 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 USP34Q70CQ2 3546 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 FASNP49327 2511 aaKnown RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 LOC102724159A0A0B4J2E5 919 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 SOWAHDA6NJG2 315 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 NBNO60934 754 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 UPP2O95045 317 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 PDGFBP01127 241 aaPredicted RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 CYP2E1P05181 493 aaPredicted RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 SRGAP2BP0DMP2 458 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 CKBP12277 381 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 GPNMBQ14956 572 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 PWP2Q15269 919 aaKnown RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 ANGPT1Q15389 498 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 NR6A1Q15406 480 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 ADGRA1Q86SQ6 560 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 MIGA1Q8NAN2 632 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 KREMEN2Q8NCW0 462 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 OR6J1Q8NGC5 347 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 CYP2W1Q8TAV3 490 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 CLP1Q92989 425 aaKnown RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 SECISBP2LQ93073 1101 aaKnown RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 ZNF512BQ96KM6 892 aaPredicted RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 FEM1BQ9UK73 627 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 SORCS3Q9UPU3 1222 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 USP15Q9Y4E8 981 aaPredicted RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 A0A1B0GUL6 1792 aa6.18□□□□□ -1.42
CKAP4-203ENST00000553039 KMT2BQ9UMN6 2715 aaPredicted RBP6.18□□□□□ -1.42
CKAP4-203ENST00000553039 CHD6Q8TD26 2715 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 MAGEB6P1A0A0J9YX57 407 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 F5H6K3 240 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 GRM6O15303 877 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 TBX10O75333 385 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 IDH1O75874 414 aaKnown RBP6.17□□□□□ -1.42
CKAP4-203ENST00000553039 CASTP20810 708 aaKnown RBP6.17□□□□□ -1.42
CKAP4-203ENST00000553039 VAMP1P23763 118 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 CTNNB1P35222 781 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 ATXN1P54253 815 aaKnown RBP6.17□□□□□ -1.42
CKAP4-203ENST00000553039 KLRC3Q07444 240 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 RBL2Q08999 1139 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 PTK7Q13308 1070 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
CKAP4-203ENST00000553039 C7orf31Q8N865 590 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 DBF4BQ8NFT6 615 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 MICAL1Q8TDZ2 1067 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 SEPT8Q92599 483 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 KIFC2Q96AC6 838 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 FGD4Q96M96 766 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 RTKNQ9BST9 563 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 TLE6Q9H808 572 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 SLC38A10Q9HBR0 1119 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 ZNFX1Q9P2E3 1918 aaKnown RBP6.17□□□□□ -1.42
CKAP4-203ENST00000553039 COL4A6Q14031 1691 aa6.17□□□□□ -1.42
CKAP4-203ENST00000553039 GBF1Q92538 1859 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 SOBPA7XYQ1 873 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 RSPH10B2B2RC85 870 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 LINC01565O15544 149 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 SRGAP3O43295 1099 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms