RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TOX2Q96NM4 488 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 VPS54Q9P1Q0 977 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 ASTN1O14525 1302 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 DCDC2CA8MYV0 355 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 EVI5O60447 810 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 RPLP2P05387 115 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 COL6A1P12109 1028 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 CIITAP33076 1130 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 ACLYP53396 1101 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 KCNA10Q16322 511 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 CELF3Q5SZQ8 465 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 UBE2Q1Q7Z7E8 422 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 DPF3Q92784 378 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 SNX21Q969T3 373 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 SHISA4Q96DD7 197 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 TMX3Q96JJ7 454 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 MTG1Q9BT17 334 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 UBIAD1Q9Y5Z9 338 aa11.68□□□□□ -0.54
TRAFD1-208ENST00000552890 NFASCO94856 1347 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 MEIS1O00470 390 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 BAG4O95429 457 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 PGK1P00558 417 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 MMP1P03956 469 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 ASGR1P07306 291 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 GNAT1P11488 350 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 SLC26A2P50443 739 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 UBE2SQ16763 222 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 JAKMIP3Q5VZ66 844 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 MCM3APO60318 1980 aa11.67□□□□□ -0.54
TRAFD1-208ENST00000552890 CYP3A7-CYP3A51PA0A087WV96 503 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 H3BQV1 296 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 TBX3O15119 743 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 GGPS1O95749 300 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 CYP3A7P24462 503 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 MRPS9P82933 396 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 PPP4R3AQ6IN85 833 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 TYW1BQ6NUM6 668 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 FBXO18Q8NFZ0 1043 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 SPATA33Q96N06 139 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 PURBQ96QR8 312 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 AZI2Q9H6S1 392 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 PDGFCQ9NRA1 345 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 KCNH7Q9NS40 1196 aa11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-208ENST00000552890 KIAA1217Q5T5P2 1943 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 MARCH6O60337 910 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 CTDNEP1O95476 244 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 HOXD8P13378 290 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 KRT76Q01546 638 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 BECN1Q14457 450 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 SNX17Q15036 470 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 LY6KQ17RY6 165 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 ANO1Q5XXA6 986 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 CCSAPQ6IQ19 270 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 ANKRD33Q7Z3H0 272 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 PLA2G4DQ86XP0 818 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 RDM1Q8NG50 284 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 SEPT1Q8WYJ6 367 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 FAM20AQ96MK3 541 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 RIT2Q99578 217 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 JPH1Q9HDC5 661 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
TRAFD1-208ENST00000552890 CENPFP49454 3210 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 ARVCFO00192 962 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 PARNO95453 639 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms