RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.061e-6■■■□□ 15
SMARCD1-210ENST00000551352 LZTS2Q9BRK4 669 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 TSEN34Q9BSV6 310 aaKnown RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 FOXP1Q9H334 677 aaPredicted RBP8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 PDGFCQ9NRA1 345 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 HOMER2Q9NSB8 354 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 MAD2L2Q9UI95 211 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 KCNJ14Q9UNX9 436 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 CLIC4Q9Y696 253 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 BDP1A6H8Y1 2624 aa8.45□□□□□ -1.06
SMARCD1-210ENST00000551352 hCG_1642624A0A1W2PR95 340 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 BTBD18B2RXH4 712 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 TTLL1O95922 423 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 CD4P01730 458 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 ASGR1P07306 291 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 BMP3P12645 472 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 SCG2P13521 617 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 COPB2P35606 906 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 PBX2P40425 430 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 PFKFB3Q16875 520 aaPredicted RBP8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 TTBK2Q6IQ55 1244 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 TAPT1Q6NXT6 567 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 KCTD1Q719H9 257 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 NOSTRINQ8IVI9 506 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 FAM126BQ8IXS8 530 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 SLC43A3Q8NBI5 491 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 LINC00301Q8NCQ3 95 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 BICD2Q8TD16 824 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 KCNG4Q8TDN1 519 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 TOX2Q96NM4 488 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 PHF20Q9BVI0 1012 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 GRPEL1Q9HAV7 217 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 STARD7Q9NQZ5 370 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 RNF146Q9NTX7 359 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 DDX19AQ9NUU7 478 aaKnown RBP8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 FEM1BQ9UK73 627 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 FAM184BQ9ULE4 1060 aa8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
SMARCD1-210ENST00000551352 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SPTLC2O15270 562 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 ZBED4O75132 1171 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 TIMP1P01033 207 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 C6orf222P0C671 652 aaPredicted RBP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 ACRP10323 421 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 XRCC6P12956 609 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 RAG1P15918 1043 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SMARCA1P28370 1054 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 KRT2P35908 639 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 ME1P48163 572 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 OAZ1P54368 228 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 FPGSQ05932 587 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SLC39A14Q15043 492 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SLC35G1Q2M3R5 365 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 PPP4R3BQ5MIZ7 849 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 CHST13Q8NET6 341 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 MAFAQ8NHW3 353 aaPredicted RBP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 GMCL1Q96IK5 515 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SPZ1Q9BXG8 430 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 NUP62CLQ9H1M0 184 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 ABHD16BQ9H3Z7 469 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 PRR12Q9ULL5 1215 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SYNPO2Q9UMS6 1093 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 MTMR7Q9Y216 660 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 SIP14410 1827 aa8.43□□□□□ -1.06
SMARCD1-210ENST00000551352 KLRF2D3W0D1 207 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 ARVCFO00192 962 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 CYTH3O43739 400 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 PLA2G6O60733 806 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 PPP6R2O75170 966 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 NR1I2O75469 434 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 SNHG28P0DPA3 235 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 PDHBP11177 359 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 ALAS1P13196 640 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 CSF2RAP15509 400 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 SMPD1P17405 629 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 DNAJB2P25686 324 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 CYP2C18P33260 490 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 TOB1P50616 345 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 STAT2P52630 851 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 NR5A1Q13285 461 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 PTPAQ15257 358 aa8.42□□□□□ -1.06
SMARCD1-210ENST00000551352 NPY5RQ15761 445 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms