RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 NT5C2P49902 561 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 SP2Q02086 613 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 NUCB1Q02818 461 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 PTK7Q13308 1070 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 CYB5R4Q7L1T6 521 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 IL31RAQ8NI17 732 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 KATNAL1Q9BW62 490 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 KRT23Q9C075 422 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 KLRF2D3W0D1 207 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 PARNO95453 639 aaKnown RBP17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 IKBKEQ14164 716 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 SEC23AQ15436 765 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 RAD9AQ99638 391 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 BCAS3Q9H6U6 928 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 CTNNA3Q9UI47 895 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 PCDHA1Q9Y5I3 950 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 LAMA4Q16363 1823 aa17.23■□□□□ 0.35
TMEM106C-216ENST00000551305 LINC01553A4QN01 128 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 GGPS1O95749 300 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 ERVK-21P61565 698 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 GHRHRQ02643 423 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 PGM5Q15124 567 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 COL4A4P53420 1690 aaPredicted RBP17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 MYH6P13533 1939 aa17.22■□□□□ 0.35
TMEM106C-216ENST00000551305 PALM3A6NDB9 673 aaPredicted RBP17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 HIP1O00291 1037 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 ZBTB5O15062 677 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 KHSRPQ92945 711 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■■■□ 21.2
TMEM106C-216ENST00000551305 TGS1Q96RS0 853 aaKnown RBP17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 C1QTNF1Q9BXJ1 281 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 TRANK1O15050 2925 aa17.21■□□□□ 0.35
TMEM106C-216ENST00000551305 LGR5O75473 907 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 UBA1P22314 1058 aaKnown RBP17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 THPOP40225 353 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 PIGSQ96S52 555 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
TMEM106C-216ENST00000551305 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
TMEM106C-216ENST00000551305 C17orf80Q9BSJ5 609 aa17.19■□□□□ 0.34
TMEM106C-216ENST00000551305 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
TMEM106C-216ENST00000551305 MAP3K20Q9NYL2 800 aaKnown RBP17.19■□□□□ 0.34
TMEM106C-216ENST00000551305 NCOR1O75376 2440 aa17.19■□□□□ 0.34
TMEM106C-216ENST00000551305 RSPH10B2B2RC85 870 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 CYTH3O43739 400 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 EFCAB14O75071 495 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 RSPH10BP0C881 870 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 PLA2G5P39877 138 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 SERINC5Q86VE9 423 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 EXOC6Q8TAG9 804 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 LRFN3Q9BTN0 628 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 CD320Q9NPF0 282 aa17.18■□□□□ 0.34
TMEM106C-216ENST00000551305 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 H3BRB1 525 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 TREHO43280 583 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 CCND2P30279 289 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 MKRN4PQ13434 485 aaPredicted RBP17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 AAMPQ13685 434 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 GRM4Q14833 912 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 FAM122AQ96E09 287 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 RNPEPQ9H4A4 650 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 RIOX1Q9H6W3 641 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 TELO2Q9Y4R8 837 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
TMEM106C-216ENST00000551305 AMHP03971 560 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 LGALS2P05162 132 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 SMIM10L2AP0DMW4 78 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 SMIM10L2BP0DMW5 78 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 TGFB3P10600 412 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
TMEM106C-216ENST00000551305 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms