RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TGFB3P10600 412 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 SDSP20132 328 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 QRICH1Q2TAL8 776 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 ARHGEF16Q5VV41 709 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 CHST3Q7LGC8 479 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 TMCO2Q7Z6W1 182 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 KAT14Q9H8E8 782 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 PXMP2Q9NR77 195 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 ZSWIM5Q9P217 1185 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 INSL6Q9Y581 213 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 SIP14410 1827 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 KDM4AO75164 1064 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 LGR5O75473 907 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 HSD17B4P51659 736 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 MFSD10Q14728 455 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 ZNF618Q5T7W0 954 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 STOX1Q6ZVD7 989 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 GDPD5Q8WTR4 605 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 C11orf16Q9NQ32 467 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
TRAFD1-207ENST00000550051 BRWD1Q9NSI6 2320 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 OPLAHO14841 1288 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 RGS20O76081 388 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 EIF2AK2P19525 551 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 ZNF200P98182 395 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 HIC1Q14526 733 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 CELF3Q5SZQ8 465 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 ENAHQ8N8S7 591 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 WNT8BQ93098 351 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 RILPL2Q969X0 211 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 MTMR8Q96EF0 704 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 VAT1LQ9HCJ6 419 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 CTNNA3Q9UI47 895 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 NEDD4P46934 1319 aa11.48□□□□□ -0.57
TRAFD1-207ENST00000550051 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 CFBP00751 764 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 PYGBP11216 843 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 HOXC8P31273 242 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 PUS10Q3MIT2 529 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 PLEKHG4Q58EX7 1191 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 DBF4BQ8NFT6 615 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 SAMD11Q96NU1 681 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 PDCD2LQ9BRP1 358 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 MICAL3Q7RTP6 2002 aa11.47□□□□□ -0.57
TRAFD1-207ENST00000550051 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 B4E1Z4 1266 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 AMHP03971 560 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 SP2Q02086 613 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 TRAF1Q13077 416 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 GJD3Q8N144 294 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 TOP1MTQ969P6 601 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 MRPL38Q96DV4 380 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 SPATA33Q96N06 139 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 CRBNQ96SW2 442 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 DSCC1Q9BVC3 393 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 KRT23Q9C075 422 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.57
TRAFD1-207ENST00000550051 PALM3A6NDB9 673 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 GRXCR2A6NFK2 248 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 H3BRB1 525 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 ZBTB5O15062 677 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 DHX16O60231 1041 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PPP1R11O60927 126 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 CAND2O75155 1236 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms