RNA–Protein interactions for RNA: ENST00000549754.1

KRT6A-204, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-204ENST00000549754 RAB30Q15771 203 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
KRT6A-204ENST00000549754 VSIG10LQ86VR7 867 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 CMTR1Q8N1G2 835 aaKnown RBP11.51□□□□□ -0.57
KRT6A-204ENST00000549754 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 C7orf31Q8N865 590 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 SMARCC2Q8TAQ2 1214 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 KAT2BQ92831 832 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 CUL5Q93034 780 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 TMEM87BQ96K49 555 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 NKX2-4Q9H2Z4 354 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 SLC12A7Q9Y666 1083 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 CACNA1BQ00975 2339 aa11.51□□□□□ -0.57
KRT6A-204ENST00000549754 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 hCG_1642624A0A1W2PR95 340 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 KRT37O76014 449 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 RGS20O76081 388 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 PFKMP08237 780 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 IQCF3P0C7M6 154 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 ACTN1P12814 892 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 UBA1P22314 1058 aaKnown RBP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 GNAQP50148 359 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 COL9A3Q14050 684 aaPredicted RBP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 NECTIN1Q15223 517 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 CELF3Q5SZQ8 465 aaKnown RBP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 RNF20Q5VTR2 975 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 PPTC7Q8NI37 304 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 MAP3K14Q99558 947 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 KATNAL1Q9BW62 490 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 HDAC6Q9UBN7 1215 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 KIAA1217Q5T5P2 1943 aa11.5□□□□□ -0.57
KRT6A-204ENST00000549754 BAZ2BQ9UIF8 2168 aaKnown RBP11.5□□□□□ -0.57
KRT6A-204ENST00000549754 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
KRT6A-204ENST00000549754 CALM1P0DP23 149 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 CALM2P0DP24 149 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 CALM3P0DP25 149 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 MYOGP15173 224 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 ATP2A2P16615 1042 aaKnown RBP11.49□□□□□ -0.57
KRT6A-204ENST00000549754 RFC2P35250 354 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 SP2Q02086 613 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 HSDL1Q3SXM5 330 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 GNPTABQ3T906 1256 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 USP17L6PQ6QN14 398 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 SYNE3Q6ZMZ3 975 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 SRBD1Q8N5C6 995 aaKnown RBP11.49□□□□□ -0.57
KRT6A-204ENST00000549754 PPM1EQ8WY54 764 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 ASB2Q96Q27 587 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 GAS2L1Q99501 681 aaPredicted RBP11.49□□□□□ -0.57
KRT6A-204ENST00000549754 MTA3Q9BTC8 594 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 EPHX3Q9H6B9 360 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
KRT6A-204ENST00000549754 YBX2Q9Y2T7 364 aaKnown RBP11.49□□□□□ -0.57
KRT6A-204ENST00000549754 CDC45O75419 566 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 F2P00734 622 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 LIFRP42702 1097 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
KRT6A-204ENST00000549754 SP4Q02446 784 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 HEATR3Q7Z4Q2 680 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 CAGE1Q8TC20 777 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 AFAP1L1Q8TED9 768 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 ATXN2LQ8WWM7 1075 aaKnown RBP11.48□□□□□ -0.57
KRT6A-204ENST00000549754 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 TCEANC2Q96MN5 208 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 NEK1Q96PY6 1258 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 GTF2IRD1Q9UHL9 959 aa11.48□□□□□ -0.57
KRT6A-204ENST00000549754 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
KRT6A-204ENST00000549754 SCN5AQ14524 2016 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 PPFIA4O75335 1185 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 TGFB3P10600 412 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 SELPP16109 830 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 IGFBP4P22692 258 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 ZNF200P98182 395 aaPredicted RBP11.47□□□□□ -0.57
KRT6A-204ENST00000549754 UBE2SQ16763 222 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 TMTC3Q6ZXV5 915 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 LRRC8DQ7L1W4 858 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
KRT6A-204ENST00000549754 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
KRT6A-204ENST00000549754 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms