RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 PARK7Q99497 189 aaKnown RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 MMTAG2Q9BU76 263 aaKnown RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 JADE2Q9NQC1 790 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 TESPA1A2RU30 521 aaPredicted RBP13.58□□□□□ -0.24
PTPRR-209ENST00000549308 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 NR3C2P08235 984 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 SLC10A3P09131 477 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 BCRP11274 1271 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 ITGB5P18084 799 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 PLCG1P19174 1290 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 CCNA1P78396 465 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 MDM2Q00987 491 aaPredicted RBP13.58□□□□□ -0.24
PTPRR-209ENST00000549308 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 GPRC5AQ8NFJ5 357 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 SLC5A5Q92911 643 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 MMP19Q99542 508 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 PTPN18Q99952 460 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 MROH8Q9H579 483 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 KDM3AQ9Y4C1 1321 aa13.58□□□□□ -0.24
PTPRR-209ENST00000549308 BIN1O00499 593 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 GAS7O60861 476 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 SMC2O95347 1197 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 CCT6AP40227 531 aaKnown RBP13.57□□□□□ -0.24
PTPRR-209ENST00000549308 MRE11P49959 708 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 GRB10Q13322 594 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 NLRX1Q86UT6 975 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 DNERQ8NFT8 737 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 PNMA5Q96PV4 448 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 TEKT3Q9BXF9 490 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 VAV3Q9UKW4 847 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 LCTP09848 1927 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 TMEM88BA6NKF7 163 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
PTPRR-209ENST00000549308 SLC26A4O43511 780 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 PSMD10O75832 226 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 TOMM70O94826 608 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 NLRP12P59046 1061 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 MTMR1Q13613 665 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 KCTD2Q14681 263 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 HAUS3Q68CZ6 603 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTPRR-209ENST00000549308 VSIG10LQ86VR7 867 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 RNF214Q8ND24 703 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 STAMQ92783 540 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 AGO4Q9HCK5 861 aaKnown RBP13.57□□□□□ -0.24
PTPRR-209ENST00000549308 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
PTPRR-209ENST00000549308 PCDHA5Q9Y5H7 936 aa13.57□□□□□ -0.24
PTPRR-209ENST00000549308 A0A087WWV3 80 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 CHMP2AO43633 222 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
PTPRR-209ENST00000549308 STAM2O75886 525 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 FCER1AP12319 257 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 ALDH5A1P51649 535 aaPredicted RBP13.56□□□□□ -0.24
PTPRR-209ENST00000549308 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 ISM2Q6H9L7 571 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
PTPRR-209ENST00000549308 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 IWS1Q96ST2 819 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 RIT2Q99578 217 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 R3HDMLQ9H3Y0 253 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
PTPRR-209ENST00000549308 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 B4DLN1 442 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 DDX39AO00148 427 aaKnown RBP13.55□□□□□ -0.24
PTPRR-209ENST00000549308 CASP1P29466 404 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 STXBP2Q15833 593 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 HYIQ5T013 277 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 OTOP1Q7RTM1 612 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
PTPRR-209ENST00000549308 PORCNQ9H237 461 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 UNC45AQ9H3U1 944 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 ZCCHC17Q9NP64 241 aaKnown RBP13.55□□□□□ -0.24
PTPRR-209ENST00000549308 TCEAL9Q9UHQ7 104 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms