RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GTF2IRD1Q9UHL9 959 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 SLC16A3O15427 465 aaKnown RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 GPTP24298 496 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 GNA11P29992 359 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 FAM110CQ1W6H9 321 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 CDKAL1Q5VV42 579 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 TYW1BQ6NUM6 668 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 RASAL3Q86YV0 1011 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 HSCBQ8IWL3 235 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 TMEM134Q9H6X4 195 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 STK39Q9UEW8 545 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 MBLAC1A4D2B0 266 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 ZBTB43O43298 467 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 HOXA2O43364 376 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 SYT1P21579 422 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 EAPPQ56P03 285 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 APTXQ7Z2E3 356 aaKnown RBP5.58□□□□□ -1.52
SCAF11-212ENST00000549162 C4orf19Q8IY42 314 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 UBR7Q8N806 425 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 WNK4Q96J92 1243 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 EHMT1Q9H9B1 1298 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 JADE2Q9NQC1 790 aa5.58□□□□□ -1.52
SCAF11-212ENST00000549162 DDTLA6NHG4 134 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 BAG4O95429 457 aaKnown RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 RGS3P49796 1198 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 PLCD1P51178 756 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 GTF2A2P52657 109 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 NCKAP1LP55160 1127 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 NCOA4Q13772 614 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 MORC3Q14149 939 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 ARCQ7LC44 396 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 CATIPQ7Z7H3 387 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 GLYCTKQ8IVS8 523 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 TEX11Q8IYF3 940 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 STK11IPQ8N1F8 1099 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 FIZ1Q96SL8 496 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 IL1RAPL2Q9NP60 686 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 HSFX1Q9UBD0 423 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 TRAF3IP3Q9Y228 551 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 TPD52L2O43399 206 aaKnown RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 LARGE1O95461 756 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 TBX2Q13207 712 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 MTMR3Q13615 1198 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 RNF43Q68DV7 783 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 PRMT6Q96LA8 375 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 FAM81BQ96LP2 452 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 HSD17B14Q9BPX1 270 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 C19orf43Q9BQ61 176 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 CCDC113Q9H0I3 377 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 DCTN4Q9UJW0 460 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 TAF6LQ9Y6J9 622 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 GBF1Q92538 1859 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF487B1APH4 448 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 RBAK-RBAKDNI3L0D1 243 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 KLRC4O43908 158 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 ICMTO60725 284 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 RTN1Q16799 776 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 EDRF1Q3B7T1 1238 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 C6orf132Q5T0Z8 1188 aa5.57□□□□□ -1.52
SCAF11-212ENST00000549162 ASTN2O75129 1339 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-212ENST00000549162 A0A1W2PQC6 194 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 CES2O00748 559 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 PRMT3O60678 531 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 FBXO45P0C2W1 286 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 MCM4P33991 863 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 ARHGAP4P98171 946 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 PTPROQ16827 1216 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 AOC3Q16853 763 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 CDC37L1Q7L3B6 337 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 ARMT1Q9H993 441 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 MRPL11Q9Y3B7 192 aaKnown RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 PTPDC1A2A3K4 754 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 DKC1O60832 514 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 ATP2B1P20020 1258 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 DPYDQ12882 1025 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 CUL4BQ13620 913 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 SYDE2Q5VT97 1194 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 DZIP1Q86YF9 867 aaKnown RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 KLHDC8BQ8IXV7 354 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 KLHDC9Q8NEP7 349 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 SOCS4Q8WXH5 440 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 OXCT2Q9BYC2 517 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 GRIN2DO15399 1336 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 P4HBP07237 508 aaKnown RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 TDO2P48775 406 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 GMPSP49915 693 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 MTMR2Q13614 643 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 CCDC73Q6ZRK6 1079 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 PRPF38AQ8NAV1 312 aaKnown RBP5.56□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF280CQ8ND82 737 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 C1orf216Q8TAB5 229 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 USP40Q9NVE5 1235 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 IMPACTQ9P2X3 320 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms