RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RPS6KB1P23443 525 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 SLC35G1Q2M3R5 365 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 FANCBQ8NB91 859 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 RGS22Q8NE09 1264 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 AMNQ9BXJ7 453 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 ZSWIM6Q9HCJ5 1215 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 CD320Q9NPF0 282 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 NFIBO00712 420 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 FGD1P98174 961 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 TRAF1Q13077 416 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 NBPF20Q3BBV1 942 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 USH1GQ495M9 461 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 NSMFQ6X4W1 530 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 Q6ZUG5 572 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 SPZ1Q9BXG8 430 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 AGXT2Q9BYV1 514 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 COL4A4P53420 1690 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-206ENST00000549139 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 PI4K2BG5E9Z4 385 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 MYL3P08590 195 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 RXRAP19793 462 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 CPT1AP50416 773 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 ALDH5A1P51649 535 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 RCAN1P53805 252 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 PIGSQ96S52 555 aa18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-206ENST00000549139 LOC102724159A0A0B4J2E5 919 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 FAM86C2PA6NEL3 165 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 ZBTB43O43298 467 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 ANAPC15P60006 121 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 PPP2R5BQ15173 497 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 PWP2Q15269 919 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 RNF207Q6ZRF8 634 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 MCF2L2Q86YR7 1114 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 SRBD1Q8N5C6 995 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 PPP1R13LQ8WUF5 828 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 LMCD1Q9NZU5 365 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
CHMP1A-206ENST00000549139 KLF18A0A0U1RQI7 1052 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 A6NJR5 290 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 BAIAP3O94812 1187 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 SEC24BO95487 1268 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 PTPN11Q06124 597 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 GPNMBQ14956 572 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 SAMD3Q8N6K7 520 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 BRF1Q92994 677 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 FTOQ9C0B1 505 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 ADD3Q9UEY8 706 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
CHMP1A-206ENST00000549139 LCHNA4D1U4 455 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 PLEKHA8P1O95397 391 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 EVCP57679 992 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 APOBRQ0VD83 1088 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 FAM47CQ5HY64 1035 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 TMTC3Q6ZXV5 915 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 OR6J1Q8NGC5 347 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 CTAGE1Q96RT6 745 aa18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 MAP3K20Q9NYL2 800 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-206ENST00000549139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 CALML3P27482 149 aa18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 WDR5P61964 334 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 BFSP2Q13515 415 aa18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 RTN1Q16799 776 aa18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 CMTR1Q8N1G2 835 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 DNERQ8NFT8 737 aa18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 TBC1D5Q92609 795 aa18.13■□□□□ 0.49
CHMP1A-206ENST00000549139 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 NKRFO15226 690 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 KPNA6O60684 536 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 EDNRBP24530 442 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 GHRHRQ02643 423 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 SLC30A10Q6XR72 485 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 TMCO2Q7Z6W1 182 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 GDPD5Q8WTR4 605 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 COPS5Q92905 334 aa18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 FAM217BQ9NTX9 383 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 SEC63Q9UGP8 760 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-206ENST00000549139 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms