RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 EPOPA6NHQ4 379 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 RFXAPO00287 272 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 PPP1R11O60927 126 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-218ENST00000548945 NBNO60934 754 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 RGS20O76081 388 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 TRDNQ13061 729 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 TRIM71Q2Q1W2 868 aaKnown RBP14.93□□□□□ -0.02
PTCH1-218ENST00000548945 CELF3Q5SZQ8 465 aaKnown RBP14.93□□□□□ -0.02
PTCH1-218ENST00000548945 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 CERS4Q9HA82 394 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 LMCD1Q9NZU5 365 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 KAT6AQ92794 2004 aa14.93□□□□□ -0.02
PTCH1-218ENST00000548945 ARHGEF15O94989 841 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 GJB5O95377 273 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 ZNF286BP0CG31 522 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 TFF2Q03403 129 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 PGM5Q15124 567 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 SKIV2LQ15477 1246 aaKnown RBP14.92□□□□□ -0.02
PTCH1-218ENST00000548945 CYB5R4Q7L1T6 521 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 SPATA33Q96N06 139 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 RAD9AQ99638 391 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 ALG1Q9BT22 464 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 ZBED2Q9BTP6 218 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 RIOX1Q9H6W3 641 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-218ENST00000548945 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
PTCH1-218ENST00000548945 GCOM1H8Y6P7 765 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-218ENST00000548945 POLR2MP0CAP2 368 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 MYCLP12524 364 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-218ENST00000548945 CCND2P30279 289 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 GRB10Q13322 594 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 IKBKEQ14164 716 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 GRM4Q14833 912 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 HSDL1Q3SXM5 330 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 TRAF7Q6Q0C0 670 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 IL25Q9H293 177 aa14.91□□□□□ -0.02
PTCH1-218ENST00000548945 PNMA6FA0A0J9YX94 578 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 LPXNO60711 386 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 STAM2O75886 525 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 GGPS1O95749 300 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 COL9A1P20849 921 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 UBA1P22314 1058 aaKnown RBP14.9□□□□□ -0.02
PTCH1-218ENST00000548945 HOXA13P31271 388 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-218ENST00000548945 HOXC8P31273 242 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 DEFB103AP81534 67 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 ZNF618Q5T7W0 954 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 SERINC5Q86VE9 423 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 IL31RAQ8NI17 732 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 EXOC6Q8TAG9 804 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 RUFY2Q8WXA3 655 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 HLA-CQ95604 372 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 C16orf70Q9BSU1 422 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
PTCH1-218ENST00000548945 DOCK5Q9H7D0 1870 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 ERICH2A1L162 156 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 LCHNA4D1U4 455 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 LGR5O75473 907 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 CYP21A2P08686 494 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 KCNQ1P51787 676 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 ERVK-21P61565 698 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 SP2Q02086 613 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 TROAPQ12815 778 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 SART3Q15020 963 aaKnown RBP14.89□□□□□ -0.03
PTCH1-218ENST00000548945 SLC35G1Q2M3R5 365 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 TTC22Q5TAA0 569 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 KRT40Q6A162 431 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 WNT8BQ93098 351 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 TGS1Q96RS0 853 aaKnown RBP14.89□□□□□ -0.03
PTCH1-218ENST00000548945 PIGSQ96S52 555 aa14.89□□□□□ -0.03
PTCH1-218ENST00000548945 IFIT3O14879 490 aaKnown RBP14.88□□□□□ -0.03
PTCH1-218ENST00000548945 CYTH3O43739 400 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 CAND2O75155 1236 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 GSPT1P15170 499 aaKnown RBP14.88□□□□□ -0.03
PTCH1-218ENST00000548945 ICAM3P32942 547 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 ZNF200P98182 395 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-218ENST00000548945 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-218ENST00000548945 MBTPS1Q14703 1052 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 WTAPQ15007 396 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 TCTN1Q2MV58 587 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 GNPTABQ3T906 1256 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 HOMER1Q86YM7 354 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 INPP4AQ96PE3 977 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-218ENST00000548945 C1QTNF1Q9BXJ1 281 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 MLXIPQ9HAP2 919 aa14.88□□□□□ -0.03
PTCH1-218ENST00000548945 C17orf102A2RUQ5 167 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 LINC01553A4QN01 128 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 RSPH10B2B2RC85 870 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 H3BRB1 525 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 RSPH10BP0C881 870 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 NEDD9Q14511 834 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 HIC1Q14526 733 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 TMCO2Q7Z6W1 182 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-218ENST00000548945 CATIPQ7Z7H3 387 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
PTCH1-218ENST00000548945 FCHSD1Q86WN1 690 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 NCOA7Q8NI08 942 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 ATP6V0A1Q93050 837 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 NECAB3Q96P71 396 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-218ENST00000548945 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms