RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZDHHC9Q9Y397 364 aa23.96■■□□□ 1.43
CACNB3-210ENST00000548874 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.95■■□□□ 1.42
CACNB3-210ENST00000548874 TGFB3P10600 412 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 TTLL4Q14679 1199 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 MTFR1Q15390 333 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 RILPL1Q5EBL4 403 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 MYSM1Q5VVJ2 828 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 PLA2G4DQ86XP0 818 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 CDHR1Q96JP9 859 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 UNC93B1Q9H1C4 597 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 KCNH7Q9NS40 1196 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 DDX41Q9UJV9 622 aaKnown RBP23.95■■□□□ 1.42
CACNB3-210ENST00000548874 MRVI1Q9Y6F6 885 aa23.95■■□□□ 1.42
CACNB3-210ENST00000548874 CCNT1O60563 726 aaKnown RBP23.94■■□□□ 1.42
CACNB3-210ENST00000548874 F13A1P00488 732 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 ARP10275 920 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 SMPD1P17405 629 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 DUSP28Q4G0W2 176 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 PRR16Q569H4 304 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 TTC38Q5R3I4 469 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 TMEM63BQ5T3F8 832 aa23.94■■□□□ 1.42
CACNB3-210ENST00000548874 COL13A1Q5TAT6 717 aaPredicted RBP23.94■■□□□ 1.42
CACNB3-210ENST00000548874 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.94■■□□□ 1.42
CACNB3-210ENST00000548874 PAK6Q9NQU5 681 aaPredicted RBP23.94■■□□□ 1.42
CACNB3-210ENST00000548874 DDX25Q9UHL0 483 aaKnown RBP23.94■■□□□ 1.42
CACNB3-210ENST00000548874 SLC37A4O43826 429 aa23.93■■□□□ 1.42
CACNB3-210ENST00000548874 TXNP10599 105 aaKnown RBP23.93■■□□□ 1.42
CACNB3-210ENST00000548874 CCL5P13501 91 aa23.93■■□□□ 1.42
CACNB3-210ENST00000548874 CNGA1P29973 690 aa23.93■■□□□ 1.42
CACNB3-210ENST00000548874 TNFAIP2Q03169 654 aa23.93■■□□□ 1.42
CACNB3-210ENST00000548874 ORC2Q13416 577 aaPredicted RBP23.93■■□□□ 1.42
CACNB3-210ENST00000548874 SENP7Q9BQF6 1050 aa23.93■■□□□ 1.42
CACNB3-210ENST00000548874 DDX20Q9UHI6 824 aaKnown RBP23.93■■□□□ 1.42
CACNB3-210ENST00000548874 GNEQ9Y223 722 aaKnown RBP23.93■■□□□ 1.42
CACNB3-210ENST00000548874 NKRFO15226 690 aaKnown RBP eCLIP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 KCNA2P16389 499 aa23.92■■□□□ 1.42
CACNB3-210ENST00000548874 ATP2B1P20020 1258 aa23.92■■□□□ 1.42
CACNB3-210ENST00000548874 UBA1P22314 1058 aaKnown RBP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 SP2Q02086 613 aa23.92■■□□□ 1.42
CACNB3-210ENST00000548874 LY6KQ17RY6 165 aa23.92■■□□□ 1.42
CACNB3-210ENST00000548874 FOXD4L5Q5VV16 416 aaPredicted RBP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 FOXD4L4Q8WXT5 416 aaPredicted RBP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 AGO4Q9HCK5 861 aaKnown RBP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 CIZ1Q9ULV3 898 aaPredicted RBP23.92■■□□□ 1.42
CACNB3-210ENST00000548874 MSH4O15457 936 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 MSCO60682 206 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 ATP9AO75110 1047 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 NUCB2P80303 420 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 NBR1Q14596 966 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 FAM173BQ6P4H8 233 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 ETNPPLQ8TBG4 499 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 LENG1Q96BZ8 264 aaPredicted RBP23.91■■□□□ 1.42
CACNB3-210ENST00000548874 KCNMB3Q9NPA1 279 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.91■■□□□ 1.42
CACNB3-210ENST00000548874 Q9Y3F1 56 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 PCDHB6Q9Y5E3 794 aa23.91■■□□□ 1.42
CACNB3-210ENST00000548874 DUSP11O75319 330 aaKnown RBP23.9■■□□□ 1.42
CACNB3-210ENST00000548874 MCM7P33993 719 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 ITGB3BPQ13352 177 aaPredicted RBP23.9■■□□□ 1.42
CACNB3-210ENST00000548874 ZNF174Q15697 407 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 GJC2Q5T442 439 aaPredicted RBP23.9■■□□□ 1.42
CACNB3-210ENST00000548874 LHX8Q68G74 356 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 POTEDQ86YR6 584 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 COPS5Q92905 334 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 RNF208Q9H0X6 261 aa23.9■■□□□ 1.42
CACNB3-210ENST00000548874 NFASCO94856 1347 aa23.89■■□□□ 1.42
CACNB3-210ENST00000548874 POTEFA5A3E0 1075 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 IPO5O00410 1097 aaKnown RBP23.89■■□□□ 1.41
CACNB3-210ENST00000548874 TBX3O15119 743 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 NEMFO60524 1076 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 PTGS1P23219 599 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 ARHGAP1Q07960 439 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 NEDD9Q14511 834 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 SLC5A5Q92911 643 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 ZNF577Q9BSK1 485 aa23.89■■□□□ 1.41
CACNB3-210ENST00000548874 DHX15O43143 795 aaKnown RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 GGPS1O95749 300 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 MYCP01106 439 aaPredicted RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 GH1P01241 217 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 RARBP10826 455 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 NKX3-2P78367 333 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 CELF3Q5SZQ8 465 aaKnown RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 ANO1Q5XXA6 986 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 TLK2Q86UE8 772 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 C4orf32Q8N8J7 132 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 GIMAP8Q8ND71 665 aaPredicted RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 HAS1Q92839 578 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 EMID1Q96A84 441 aaPredicted RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 UPF3AQ9H1J1 476 aaKnown RBP23.88■■□□□ 1.41
CACNB3-210ENST00000548874 TMEM60Q9H2L4 133 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 BCAS3Q9H6U6 928 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 PKD2L1Q9P0L9 805 aa23.88■■□□□ 1.41
CACNB3-210ENST00000548874 FRMPD3Q5JV73 1810 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 MYH15Q9Y2K3 1946 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 FARP2O94887 1054 aaPredicted RBP23.87■■□□□ 1.41
CACNB3-210ENST00000548874 METTL7BQ6UX53 244 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 FAM20AQ96MK3 541 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 MTMR9Q96QG7 549 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 RIT2Q99578 217 aa23.87■■□□□ 1.41
CACNB3-210ENST00000548874 TBC1D22BQ9NU19 505 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms