RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 KRT2P35908 639 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 ZNF844Q08AG5 666 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 KLHL30Q0D2K2 578 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 TRADDQ15628 312 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 LACTB2Q53H82 288 aaPredicted RBP11.28□□□□□ -0.6
SOD2-216ENST00000546260 MAP3K19Q56UN5 1328 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
SOD2-216ENST00000546260 APLFQ8IW19 511 aaPredicted RBP11.28□□□□□ -0.6
SOD2-216ENST00000546260 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 SIKE1Q9BRV8 207 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
SOD2-216ENST00000546260 LIMA1Q9UHB6 759 aaKnown RBP11.28□□□□□ -0.6
SOD2-216ENST00000546260 TBK1Q9UHD2 729 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
SOD2-216ENST00000546260 MINDY4BA8MYZ0 360 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 CALCOCO2Q13137 446 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 MPP3Q13368 585 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 IDI1Q13907 227 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 ITIH4Q14624 930 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 NANOGNBQ7Z5D8 188 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.6
SOD2-216ENST00000546260 NMD3Q96D46 503 aaKnown RBP11.27□□□□□ -0.6
SOD2-216ENST00000546260 ATXN10Q9UBB4 475 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 DAAM1Q9Y4D1 1078 aa11.27□□□□□ -0.6
SOD2-216ENST00000546260 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 FGAP02671 866 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 REXO2Q9Y3B8 237 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 SHBGP04278 402 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 GSTA2P09210 222 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 ATP5DP30049 168 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 NME8Q8N427 588 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 DDX50Q9BQ39 737 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.61
SOD2-216ENST00000546260 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.61
SOD2-216ENST00000546260 SHPRHQ149N8 1683 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 IGBP1P78318 339 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 RIPK1Q13546 671 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 TTC38Q5R3I4 469 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 NCAPG2Q86XI2 1143 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 ZNF653Q96CK0 615 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 ERP27Q96DN0 273 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 CEP152O94986 1710 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 CROCCP2Q86T23 111 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 GSDMBQ8TAX9 411 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 MIS12Q9H081 205 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 PRCPP42785 496 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 GJA8P48165 433 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 USP46P62068 366 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 BYSLQ13895 437 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 CCDC62Q6P9F0 684 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 CCDC77Q9BR77 488 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 CNOT8Q9UFF9 292 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 SNX24Q9Y343 169 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 TSC22D4Q9Y3Q8 395 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 MAGEA13PA6NCF6 341 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.611e-7■■■□□ 16.6
SOD2-216ENST00000546260 DNAJC6O75061 913 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 COQ9O75208 318 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 SLC1A4P43007 532 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 NCALDP61601 193 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 MCL1Q07820 350 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 ADAM9Q13443 819 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 RBM12BQ8IXT5 1001 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 CEP63Q96MT8 703 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 LRRC37BQ96QE4 947 aa11.26□□□□□ -0.61
SOD2-216ENST00000546260 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.26□□□□□ -0.612e-11■■□□□ 13
SOD2-216ENST00000546260 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 DBR1Q9UK59 544 aaKnown RBP11.26□□□□□ -0.61
SOD2-216ENST00000546260 MED23Q9ULK4 1368 aa11.25□□□□□ -0.61
SOD2-216ENST00000546260 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
SOD2-216ENST00000546260 KRT18P05783 430 aaKnown RBP11.25□□□□□ -0.61
SOD2-216ENST00000546260 VHLP40337 213 aa11.25□□□□□ -0.61
SOD2-216ENST00000546260 PEX5P50542 639 aa11.25□□□□□ -0.61
SOD2-216ENST00000546260 PTPAQ15257 358 aa11.25□□□□□ -0.61
SOD2-216ENST00000546260 ZNF658Q5TYW1 1059 aaPredicted RBP11.25□□□□□ -0.61
SOD2-216ENST00000546260 USPL1Q5W0Q7 1092 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms