RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CEP55Q53EZ4 464 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 ARRDC4Q8NCT1 418 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 CYP2W1Q8TAV3 490 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 CCDC194A0A1B0GVG4 234 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 CTAGE5O15320 804 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 DYNC1LI2O43237 492 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-211ENST00000545998 IRX5P78411 483 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-211ENST00000545998 SP2Q02086 613 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 EARS2Q5JPH6 523 aaKnown RBP23.33■■□□□ 1.33
HMGA2-211ENST00000545998 RNF180Q86T96 592 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 KLHDC9Q8NEP7 349 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 SPC25Q9HBM1 224 aa23.33■■□□□ 1.33
HMGA2-211ENST00000545998 MYADML2A6NDP7 307 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 FAM86B1E9PN63 330 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 DNM1LO00429 736 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 MEIS1O00470 390 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 FAM86B2P0C5J1 330 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 CIITAP33076 1130 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 USP11P51784 963 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 MTMR1Q13613 665 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 SAFBQ15424 915 aaKnown RBP eCLIP23.32■■□□□ 1.32
HMGA2-211ENST00000545998 NIPA1Q7RTP0 329 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 CDHR1Q96JP9 859 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 AP5M1Q9H0R1 490 aa23.32■■□□□ 1.32
HMGA2-211ENST00000545998 C6orf222P0C671 652 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 UBA1P22314 1058 aaKnown RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 CST5P28325 142 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 ZNF76P36508 570 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 ARHGAP1Q07960 439 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 INF2Q27J81 1249 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 PIK3AP1Q6ZUJ8 805 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 UBE2Q1Q7Z7E8 422 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 OR6J1Q8NGC5 347 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 IGLV3-22A0A075B6J6 115 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 MAFGO15525 162 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 CAPN15O75808 1086 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 GH1P01241 217 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 MYCNP04198 464 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 CCSAPQ6IQ19 270 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 DIS3LQ8TF46 1054 aaKnown RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 EMID1Q96A84 441 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-211ENST00000545998 KCNH7Q9NS40 1196 aa23.31■■□□□ 1.32
HMGA2-211ENST00000545998 FAM205CA6NFA0 338 aa23.3■■□□□ 1.32
HMGA2-211ENST00000545998 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-211ENST00000545998 FSCN1Q16658 493 aaKnown RBP23.3■■□□□ 1.32
HMGA2-211ENST00000545998 CELF3Q5SZQ8 465 aaKnown RBP23.3■■□□□ 1.32
HMGA2-211ENST00000545998 SENP7Q9BQF6 1050 aa23.3■■□□□ 1.32
HMGA2-211ENST00000545998 FOXP1Q9H334 677 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-211ENST00000545998 KBTBD13C9JR72 458 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 ATP9AO75110 1047 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 GGPS1O95749 300 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 ARP10275 920 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 KCNA2P16389 499 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 BEX3Q00994 111 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 GNASQ5JWF2 1037 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 MYSM1Q5VVJ2 828 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 BCAS3Q9H6U6 928 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 FOXD4L1Q9NU39 408 aa23.29■■□□□ 1.32
HMGA2-211ENST00000545998 TNRC18O15417 2968 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-211ENST00000545998 CYP3A7-CYP3A51PA0A087WV96 503 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 CYP3A7P24462 503 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 LAMC2Q13753 1193 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 NEDD9Q14511 834 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 KCNA10Q16322 511 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 LARP1BQ659C4 914 aaKnown RBP23.28■■□□□ 1.32
HMGA2-211ENST00000545998 NEK8Q86SG6 692 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 PLA2G4DQ86XP0 818 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 DHX37Q8IY37 1157 aaKnown RBP23.28■■□□□ 1.32
HMGA2-211ENST00000545998 LENG9Q96B70 501 aa23.28■■□□□ 1.32
HMGA2-211ENST00000545998 PAWRQ96IZ0 340 aaKnown RBP23.28■■□□□ 1.32
HMGA2-211ENST00000545998 TSEN34Q9BSV6 310 aaKnown RBP23.28■■□□□ 1.32
HMGA2-211ENST00000545998 A6NJR5 290 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 COL6A1P12109 1028 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 CPT1AP50416 773 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 SETQ01105 290 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-211ENST00000545998 PRR16Q569H4 304 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 MOXD1Q6UVY6 613 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 MBOAT7Q96N66 472 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 AGO4Q9HCK5 861 aaKnown RBP23.27■■□□□ 1.32
HMGA2-211ENST00000545998 PHF24Q9UPV7 400 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 KIF28PB7ZC32 967 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 TDP2O95551 362 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 U2AF2P26368 475 aaKnown RBP eCLIP23.27■■□□□ 1.327e-10■□□□□ 10.7
HMGA2-211ENST00000545998 LETM2Q2VYF4 491 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 METTL7BQ6UX53 244 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 CYFIP1Q7L576 1253 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 PCSK9Q8NBP7 692 aaKnown RBP23.27■■□□□ 1.32
HMGA2-211ENST00000545998 GIMAP8Q8ND71 665 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-211ENST00000545998 PPTC7Q8NI37 304 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 AFG1LQ8WV93 481 aa23.27■■□□□ 1.32
HMGA2-211ENST00000545998 MOXD2PA6NHM9 499 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 H3BQV1 296 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 SORBS3O60504 671 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 ASGR1P07306 291 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 ACLYP53396 1101 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 Q4G0T1 1027 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 IFFO2Q5TF58 517 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 NECAB2Q7Z6G3 386 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 NOSTRINQ8IVI9 506 aa23.26■■□□□ 1.31
HMGA2-211ENST00000545998 C11orf49Q9H6J7 331 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms