RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 SP2Q02086 613 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 MFSD10Q14728 455 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 GNPTABQ3T906 1256 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 SMARCC2Q8TAQ2 1214 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 CAGE1Q8TC20 777 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 CUL5Q93034 780 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 LRRC2Q9BYS8 371 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 KIAA0753Q2KHM9 967 aa26.22■■□□□ 1.79
CHD4-214ENST00000545942 HSDL1Q3SXM5 330 aa26.22■■□□□ 1.79
CHD4-214ENST00000545942 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.22■■□□□ 1.79
CHD4-214ENST00000545942 CTAGE1Q96RT6 745 aa26.22■■□□□ 1.79
CHD4-214ENST00000545942 ALG1Q9BT22 464 aa26.22■■□□□ 1.79
CHD4-214ENST00000545942 HDAC6Q9UBN7 1215 aa26.22■■□□□ 1.79
CHD4-214ENST00000545942 HAS3O00219 553 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 PIK3CDO00329 1044 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 SORBS3O60504 671 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 ACTN1P12814 892 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 MRPS9P82933 396 aaKnown RBP26.21■■□□□ 1.79
CHD4-214ENST00000545942 CMTR1Q8N1G2 835 aaKnown RBP26.21■■□□□ 1.79
CHD4-214ENST00000545942 AFAP1L1Q8TED9 768 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 GPKOWQ92917 476 aaPredicted RBP eCLIP26.21■■□□□ 1.79
CHD4-214ENST00000545942 INPP4AQ96PE3 977 aaPredicted RBP26.21■■□□□ 1.79
CHD4-214ENST00000545942 MLXIPQ9HAP2 919 aa26.21■■□□□ 1.79
CHD4-214ENST00000545942 CDC45O75419 566 aa26.2■■□□□ 1.79
CHD4-214ENST00000545942 USP17L6PQ6QN14 398 aa26.2■■□□□ 1.79
CHD4-214ENST00000545942 SGMS1Q86VZ5 419 aa26.2■■□□□ 1.79
CHD4-214ENST00000545942 FANCBQ8NB91 859 aa26.2■■□□□ 1.79
CHD4-214ENST00000545942 NEK1Q96PY6 1258 aa26.2■■□□□ 1.79
CHD4-214ENST00000545942 EYSQ5T1H1 3165 aa26.2■■□□□ 1.78
CHD4-214ENST00000545942 MEIS2O14770 477 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 ATP2A2P16615 1042 aaKnown RBP26.19■■□□□ 1.78
CHD4-214ENST00000545942 ICAM3P32942 547 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 SYNE3Q6ZMZ3 975 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 MICU3Q86XE3 530 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 RAB11FIP4Q86YS3 637 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 FTOQ9C0B1 505 aaKnown RBP eCLIP26.19■■□□□ 1.784e-11■■□□□ 11.8
CHD4-214ENST00000545942 NKX2-4Q9H2Z4 354 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 SLC28A3Q9HAS3 691 aa26.19■■□□□ 1.78
CHD4-214ENST00000545942 YBX2Q9Y2T7 364 aaKnown RBP26.19■■□□□ 1.78
CHD4-214ENST00000545942 RBL2Q08999 1139 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 PCNX4Q63HM2 1172 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 XRRA1Q6P2D8 792 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 TMTC3Q6ZXV5 915 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 DHX38Q92620 1227 aaKnown RBP26.18■■□□□ 1.78
CHD4-214ENST00000545942 RTEL1Q9NZ71 1219 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 PCDHA11Q9Y5I1 949 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 A0A0C4DFX4 3053 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 UNC80Q8N2C7 3258 aa26.18■■□□□ 1.78
CHD4-214ENST00000545942 SPATA31C2B4DYI2 1134 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 FIBPO43427 364 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 SELPP16109 830 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 RABGGTBP53611 331 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 NEDD9Q14511 834 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 CCDC82Q8N4S0 544 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 GAS2L1Q99501 681 aaPredicted RBP26.17■■□□□ 1.78
CHD4-214ENST00000545942 PSTPIP2Q9H939 334 aa26.17■■□□□ 1.78
CHD4-214ENST00000545942 NOP56O00567 594 aaKnown RBP26.16■■□□□ 1.78
CHD4-214ENST00000545942 PARNO95453 639 aaKnown RBP26.16■■□□□ 1.78
CHD4-214ENST00000545942 PTK7Q13308 1070 aa26.16■■□□□ 1.78
CHD4-214ENST00000545942 TSGA10IPQ3SY00 556 aa26.16■■□□□ 1.78
CHD4-214ENST00000545942 LRRC8DQ7L1W4 858 aa26.16■■□□□ 1.78
CHD4-214ENST00000545942 C16orf70Q9BSU1 422 aa26.16■■□□□ 1.78
CHD4-214ENST00000545942 PRDM12Q9H4Q4 367 aa26.16■■□□□ 1.78
CHD4-214ENST00000545942 SEMA3FQ13275 785 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 KRT32Q14532 448 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 APOA5Q6Q788 366 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 METTL7BQ6UX53 244 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 DHX32Q7L7V1 743 aaKnown RBP26.15■■□□□ 1.78
CHD4-214ENST00000545942 SLC9A7Q96T83 725 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 BCAS3Q9H6U6 928 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 TANC1Q9C0D5 1861 aa26.15■■□□□ 1.78
CHD4-214ENST00000545942 hCG_1642624A0A1W2PR95 340 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 CKBP12277 381 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 EXOSC10Q01780 885 aaKnown RBP26.14■■□□□ 1.78
CHD4-214ENST00000545942 CYFIP1Q7L576 1253 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 NLRX1Q86UT6 975 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 RASEFQ8IZ41 740 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 USP26Q9BXU7 913 aa26.14■■□□□ 1.78
CHD4-214ENST00000545942 RBM28Q9NW13 759 aaKnown RBP26.14■■□□□ 1.78
CHD4-214ENST00000545942 SCN5AQ14524 2016 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 H3BRB1 525 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 BAIAP3O94812 1187 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 LGALS2P05162 132 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 PPP2R2DQ66LE6 453 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 HEATR3Q7Z4Q2 680 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 PHOSPHO2Q8TCD6 241 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 SENP7Q9BQF6 1050 aa26.14■■□□□ 1.77
CHD4-214ENST00000545942 TUT1Q9H6E5 874 aaKnown RBP26.14■■□□□ 1.77
CHD4-214ENST00000545942 MYOGP15173 224 aa26.13■■□□□ 1.77
CHD4-214ENST00000545942 ZNF200P98182 395 aaPredicted RBP26.13■■□□□ 1.77
CHD4-214ENST00000545942 GPNMBQ14956 572 aa26.13■■□□□ 1.77
CHD4-214ENST00000545942 ADCK5Q3MIX3 580 aa26.13■■□□□ 1.77
CHD4-214ENST00000545942 CCDC136Q96JN2 1154 aa26.13■■□□□ 1.77
CHD4-214ENST00000545942 TCEANC2Q96MN5 208 aa26.13■■□□□ 1.77
CHD4-214ENST00000545942 MYH7BA7E2Y1 1941 aa26.12■■□□□ 1.77
CHD4-214ENST00000545942 ZBTB43O43298 467 aa26.12■■□□□ 1.77
CHD4-214ENST00000545942 HMGB1P09429 215 aaKnown RBP26.12■■□□□ 1.77
CHD4-214ENST00000545942 HIC1Q14526 733 aa26.12■■□□□ 1.77
CHD4-214ENST00000545942 TRIM71Q2Q1W2 868 aaKnown RBP26.12■■□□□ 1.77
CHD4-214ENST00000545942 GIMAP8Q8ND71 665 aaPredicted RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms