RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 FOXR2Q6PJQ5 311 aa16.93■□□□□ 0.3
CNN3-207ENST00000545882 CLEC10AQ8IUN9 316 aa16.93■□□□□ 0.3
CNN3-207ENST00000545882 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
CNN3-207ENST00000545882 HAS1Q92839 578 aa16.93■□□□□ 0.3
CNN3-207ENST00000545882 GREB1LQ9C091 1923 aaPredicted RBP16.93■□□□□ 0.3
CNN3-207ENST00000545882 MYO1CO00159 1063 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 TRIM66O15016 1216 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 NOL4O94818 638 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 MAGEA1P43355 309 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
CNN3-207ENST00000545882 MRPS25P82663 173 aaKnown RBP16.92■□□□□ 0.3
CNN3-207ENST00000545882 GFPT1Q06210 699 aaPredicted RBP16.92■□□□□ 0.3
CNN3-207ENST00000545882 GABPAQ06546 454 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 UBE2SQ16763 222 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 GJA10Q969M2 543 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 MTMR8Q96EF0 704 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 FGFBP2Q9BYJ0 223 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 JMJD4Q9H9V9 463 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 RRP15Q9Y3B9 282 aaKnown RBP16.92■□□□□ 0.3
CNN3-207ENST00000545882 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 AKR1B1P15121 316 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 COASYQ13057 564 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 MFSD14BQ5SR56 506 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 PPP4R3AQ6IN85 833 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 EDEM3Q9BZQ6 932 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 DEF6Q9H4E7 631 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 RIC8AQ9NPQ8 531 aa16.92■□□□□ 0.3
CNN3-207ENST00000545882 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 TLR2O60603 784 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 CXCR5P32302 372 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 SLC1A4P43007 532 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 HAUS3Q68CZ6 603 aa16.91■□□□□ 0.3
CNN3-207ENST00000545882 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 SSU72P8A0A1W2PR75 194 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 TCP1P17987 556 aaKnown RBP16.9■□□□□ 0.3
CNN3-207ENST00000545882 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
CNN3-207ENST00000545882 TNNI2P48788 182 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
CNN3-207ENST00000545882 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 RASSF7Q02833 373 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 SLC20A2Q08357 652 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 MYOCDQ8IZQ8 938 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 PROM2Q8N271 834 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 RPGRQ92834 1020 aaKnown RBP16.9■□□□□ 0.3
CNN3-207ENST00000545882 PSMB7Q99436 277 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 RAB34Q9BZG1 259 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 TTBK2Q6IQ55 1244 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
CNN3-207ENST00000545882 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 ADGRF4Q8IZF3 695 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 RUBCNQ92622 972 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 TSG101Q99816 390 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 COL4A3BPQ9Y5P4 624 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 AFF2P51816 1311 aa16.9■□□□□ 0.3
CNN3-207ENST00000545882 PNMA6FA0A0J9YX94 578 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 BUB1O43683 1085 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.297e-7■□□□□ 11.2
CNN3-207ENST00000545882 ZNF543Q08ER8 600 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
CNN3-207ENST00000545882 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
CNN3-207ENST00000545882 ALS2CR12Q96Q35 445 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 TSPYL1Q9H0U9 437 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 CEP72Q9P209 647 aa16.89■□□□□ 0.29
CNN3-207ENST00000545882 DDX25Q9UHL0 483 aaKnown RBP16.89■□□□□ 0.29
CNN3-207ENST00000545882 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 SERPINB2P05120 415 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
CNN3-207ENST00000545882 FKBP3Q00688 224 aaKnown RBP16.88■□□□□ 0.29
CNN3-207ENST00000545882 APBA1Q02410 837 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 HYIQ5T013 277 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 CCDC70Q6NSX1 233 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
CNN3-207ENST00000545882 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
CNN3-207ENST00000545882 GOLGA6BA6NDN3 693 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 E9PMD0 336 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 TRAF5O00463 557 aa16.88■□□□□ 0.29
CNN3-207ENST00000545882 SHOX2O60902 331 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms