RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 NSUN6Q8TEA1 469 aaKnown RBP14.4□□□□□ -0.1
ACTN1-206ENST00000544964 AFG1LQ8WV93 481 aa14.4□□□□□ -0.1
ACTN1-206ENST00000544964 MTMR8Q96EF0 704 aa14.4□□□□□ -0.1
ACTN1-206ENST00000544964 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
ACTN1-206ENST00000544964 GAS2L1Q99501 681 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-206ENST00000544964 SLC4A7Q9Y6M7 1214 aa14.4□□□□□ -0.1
ACTN1-206ENST00000544964 PALM3A6NDB9 673 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-206ENST00000544964 GOLGA8AA7E2F4 631 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 KPNA6O60684 536 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 CALM1P0DP23 149 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 CALM2P0DP24 149 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 CALM3P0DP25 149 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 HSD17B4P51659 736 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-206ENST00000544964 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 FBXO11Q86XK2 927 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 CTCFLQ8NI51 663 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-206ENST00000544964 KAT2BQ92831 832 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
ACTN1-206ENST00000544964 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 B4DLN1 442 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 DHX16O60231 1041 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 GH1P01241 217 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 ATP2A2P16615 1042 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 PDIA3P30101 505 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 MRPL12P52815 198 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 EVCP57679 992 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 STK3Q13188 491 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 SEPT14Q6ZU15 432 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 SESTD1Q86VW0 696 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 CMTR1Q8N1G2 835 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 FANCBQ8NB91 859 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 IWS1Q96ST2 819 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 VAT1LQ9HCJ6 419 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
ACTN1-206ENST00000544964 DOCK5Q9H7D0 1870 aa14.38□□□□□ -0.11
ACTN1-206ENST00000544964 RGS20O76081 388 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 LARGE1O95461 756 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 CDC27P30260 824 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 KIF5BP33176 963 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 RFC2P35250 354 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 METAP2P50579 478 aaKnown RBP eCLIP14.37□□□□□ -0.111e-7■■■■■ 29
ACTN1-206ENST00000544964 CCT2P78371 535 aaKnown RBP14.37□□□□□ -0.11
ACTN1-206ENST00000544964 STXBP2Q15833 593 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 RTN1Q16799 776 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 TJAP1Q5JTD0 557 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 GDF6Q6KF10 455 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-206ENST00000544964 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-206ENST00000544964 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
ACTN1-206ENST00000544964 DDX41Q9UJV9 622 aaKnown RBP14.37□□□□□ -0.11
ACTN1-206ENST00000544964 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 ST18O60284 1047 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 ARHGEF15O94989 841 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
ACTN1-206ENST00000544964 F2P00734 622 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 CFBP00751 764 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 NR3C2P08235 984 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 HOXD8P13378 290 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-206ENST00000544964 RBL2Q08999 1139 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 GPNMBQ14956 572 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 PTGISQ16647 500 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 PPM1EQ8WY54 764 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
ACTN1-206ENST00000544964 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
ACTN1-206ENST00000544964 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-206ENST00000544964 ZBTB5O15062 677 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 EIF3JO75822 258 aaKnown RBP14.35□□□□□ -0.11
ACTN1-206ENST00000544964 CA3P07451 260 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 ZNF286BP0CG31 522 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 IGFBP4P22692 258 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
ACTN1-206ENST00000544964 GNAQP50148 359 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 RCAN1P53805 252 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 CHMP4BP1P59074 171 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 BFSP2Q13515 415 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 ME3Q16798 604 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 SRBD1Q8N5C6 995 aaKnown RBP14.35□□□□□ -0.11
ACTN1-206ENST00000544964 PPTC7Q8NI37 304 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 SLC9A7Q96T83 725 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms