RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-216ENST00000543995 KCNH7Q9NS40 1196 aa16.45■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
TNFRSF1A-216ENST00000543995 FRMPD3Q5JV73 1810 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MEIS1O00470 390 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MAFGO15525 162 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ADCY6O43306 1168 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 EDIL3O43854 480 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ARIH2O95376 493 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DUSP28Q4G0W2 176 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TMEM63BQ5T3F8 832 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GJC2Q5T442 439 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 CCDC62Q6P9F0 684 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MOXD1Q6UVY6 613 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DOCK5Q9H7D0 1870 aa16.44■□□□□ 0.22
TNFRSF1A-216ENST00000543995 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DUSP11O75319 330 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ARP10275 920 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 Q4G0T1 1027 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 BRAPQ7Z569 592 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 COPS5Q92905 334 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ABHD8Q96I13 439 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
TNFRSF1A-216ENST00000543995 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SORBS3O60504 671 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GH1P01241 217 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GJB1P08034 283 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 UBA1P22314 1058 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PTGS1P23219 599 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 CYP3A7P24462 503 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MCM7P33993 719 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 NEDD9Q14511 834 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 RILPL1Q5EBL4 403 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TTC38Q5R3I4 469 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PPP4R3AQ6IN85 833 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TLK2Q86UE8 772 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GIMAP8Q8ND71 665 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 AP5M1Q9H0R1 490 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 AGO4Q9HCK5 861 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SLC37A4O43826 429 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MARCH6O60337 910 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ATP9AO75110 1047 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GGPS1O95749 300 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ZSCAN22P10073 491 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SP2Q02086 613 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 RESTQ13127 1097 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PKP1Q13835 747 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 LHX8Q68G74 356 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 LENG9Q96B70 501 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 Q9Y3F1 56 aa16.41■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 WNT7AO00755 349 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SGPL1O95470 568 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 PGK1P00558 417 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TFRCP02786 760 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 KCNA2P16389 499 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 NBR1Q14596 966 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 ZNF174Q15697 407 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MBOAT7Q96N66 472 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 DDX39AO00148 427 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MSH4O15457 936 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 NEMFO60524 1076 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 F13A1P00488 732 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 GJA9P57773 515 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SP4Q02446 784 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 RNF180Q86T96 592 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 SPATA33Q96N06 139 aa16.4■□□□□ 0.22
TNFRSF1A-216ENST00000543995 TCEAL9Q9UHQ7 104 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms